| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0218 |
|---|
| Symbol | |
|---|
| ID | 4030812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 238066 |
|---|
| End bp | 239172 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637968754 |
|---|
| Product | 2'-deoxycytidine 5'-triphosphate deaminase |
|---|
| Protein accession | YP_575578 |
|---|
| Protein GI | 92115849 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0717] Deoxycytidine deaminase |
|---|
| TIGRFAM ID | [TIGR02274] deoxycytidine triphosphate deaminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCATTCA CGCTTCCTCC AGACGCCAAT GGCATTCTGC CCGACCGCAT GATCGCGGCG
ATGGCGGACG CGGGGCTGAT CCTGCCGGAA TACCCATTCG TCGAGAGCCA GATCCAGCCG
GCGAGTCTCG ATCTGCGGCT CGGCGCCATG GCCTATCGGG TGCGCGCCAG TTTTCTGCCC
GGGCCGGGCG CAACGGTGGC GGAGCGCATC GACGAGTTGA AGCTGCACGA AATCGATCTG
TCCGACGGCG CGGTGCTGGA AACCAACTGC GTCTATATCG TGCCGCTGCT GGAGAGCCTG
GCGCTGCCGC CCGAGATCGT CGCCGCCGCC AACCCGAAAA GCTCGACCGG GCGGCTCGAC
GTGTTCACCC GCGTGATCGC CGACGGCACC CGGCGCTTCG ACATGATCGG CGCCGGCTAT
CACGGCCCGC TTTATGCGGA AATCAGTCCG AAGACGTTTC CGGTGTTGCT GCGCGAGGGA
TCGCGGCTGT CGCAGGTCCG CTTCCGCAGC GGCGACGCCA TTCTCGATGC CGACGAGCTC
GATGCGCTGC ATGCACGAGA GAGGCTGGTC GATAGCGACG ACACCGAGTT CGCCAACGGC
GTAGCGCTCA GCGTCGATCT CTCCGGCGAG AACGCCGACG GCTTTGTCGG CTACCGCGCC
AAGCGTCATA CCGGCGTGAT CGATATCGAT CGCCGCGGCC GCTATGCGGT CGGCGAGTTC
TGGGAGCCGA TCGCGGCGCG GCCGGACGGC AGCCTGATCC TCGATCCCGG CGAGTTCTAC
ATCCTCGCAT CAAAAGAAGC GGTGCAGGTG CCGCCCGATT ACGCCGCGGA AATGGTGCCG
TTCGATCCGC TGGTCGGCGA ATTCCGGGTG CATTATGCCG GCTTCTTCGA TCCCGGCTTC
GGTTATGCCG GCGCCGGCGG ACAGGGTTCG CGCGCGGTGC TGGAGGTGCG CTCGCGCGAG
GTGCCGTTCA TTCTCGAGCA TGGCCAGATC GTCGGCCGTC TCGTCTATGA GAAGATGCTG
GCGCGGCCCG ACGCGATCTA CGGCCAGCGC ATCGGCTCCA GCTATCAGGC CCAGGGCCTC
AAGCTGTCGA AGCATTTCCG GGTGTAG
|
|---|
| Protein sequence | MPFTLPPDAN GILPDRMIAA MADAGLILPE YPFVESQIQP ASLDLRLGAM AYRVRASFLP
GPGATVAERI DELKLHEIDL SDGAVLETNC VYIVPLLESL ALPPEIVAAA NPKSSTGRLD
VFTRVIADGT RRFDMIGAGY HGPLYAEISP KTFPVLLREG SRLSQVRFRS GDAILDADEL
DALHARERLV DSDDTEFANG VALSVDLSGE NADGFVGYRA KRHTGVIDID RRGRYAVGEF
WEPIAARPDG SLILDPGEFY ILASKEAVQV PPDYAAEMVP FDPLVGEFRV HYAGFFDPGF
GYAGAGGQGS RAVLEVRSRE VPFILEHGQI VGRLVYEKML ARPDAIYGQR IGSSYQAQGL
KLSKHFRV
|
|---|
| |