| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0197 |
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| Symbol | |
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| ID | 4030657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 220814 |
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| End bp | 222166 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637968733 |
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| Product | Fmu (Sun) |
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| Protein accession | YP_575558 |
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| Protein GI | 92115829 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0130363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGTCAA CCAGATTCGC ACCGCCTGTC GAGGTCCCCG GCCTCGCGGC CCGGCGCATC
GCAGCGGATA TCCTCGACGG CGTCCTGCAT AAGCATCGCA CGCTCGACGA ACAACTCGAG
GGCGCCGCCG CGCATCCCGG CCTGAAAGCG CTCGCCGATC GTGACCGCGC CTTGATGCGG
CGGCTGGTCG CGACGATCCT GCGCCGGCTC GGAACTCTCG GCCATGTGCT GTCGCGGCTG
CTCGATCGCG GCATTCCGAC CGATGCGCCG CGCGCGCAGA GCGCGCTTTT GATCGGGGCT
GCGCAGATTC TCTGGATGGA CGTGCCGGAT CATGCCGCGG TCGATCTGTC GGTGCGGCTT
GTGCAATCCG ACCGCCGCGC GGCGAAATAT GCGGGACTTG TCAACGCTGT GCTTCGCCGC
TGCGCGCGCG AAGGCCAGCC CCTGATCGAC GAGGTTCGAT CGGAGGCGCT CGATATCCCG
CCGTGGCTGA TGACGCGTTG GATCGCGAAC TACGGCGAGA ACACCGCGAA AGCCATCGCC
ACGGCGATCA GCCACGAACC GTCCCTCGAT CTCACCGTCA AGGCGGGCGC GGCGCAGTGG
GCGACGCGGC TGCACGGCGA GGTTCTGCCG ACCGGAACCG TTCGCACCGC GTTGCAGGGC
CCGGTGACAA TGCTGCCCGG ATTTTCCGAA GGACGGTGGT GGGTGCAGGA CGCCGCCGCC
GCGCTGCCGG CGCGGCTGTT CGGCGATCTC CAAGGACGGC GCGTCGCCGA TCTCTGCGCG
GCGCCGGGCG GCAAGACCGC GCAGCTCGCG CAGGCCGGCG CGGAGGTGAC CGCGATCGAC
CGGTCGCCAA ATCGGGTGGC ACGGTTGCGC GACAATCTCG GCCGGCTGTC GCTGGGCGCG
CGGGCACTCG TCGCCGATGC CGTCGAATGG CAGGATGATG CCGCAGGCAG CGGCTTCGAT
GGTGTGCTGG TCGACGCGCC CTGCTCCTCG ACCGGCACCA TCCGCAGGCA TCCGGACGTG
GCCTGGCTCA AGCAGGATTC GGATATCGCG GCGCTGACGG CCCTGCAAAA GCGGCTGCTG
CAAAAAGCAT TCGCGCTGCT CAAGCCCGGC GGAACGCTGG TCTACTGCAC CTGCTCGCTG
GAACCCGAAG AGGGCGAACA CCTCGTCGGC GCGCTGCTCG CATCCGAGGC AGGCGTGCGG
CGCGTGCCGA TCGGCGCCGC GGAAGTGGCC GGACTGGAGG ATATCGTGAC GCCCGCGGGC
GATCTGCGCA CCCTGCCCTG CCATCTGCCG CATGACGATC CCAGGCTGAG CGGGCTCGAC
GGTTTCTACG CGGCGCGATT GATCAAATCC TGA
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| Protein sequence | MPSTRFAPPV EVPGLAARRI AADILDGVLH KHRTLDEQLE GAAAHPGLKA LADRDRALMR
RLVATILRRL GTLGHVLSRL LDRGIPTDAP RAQSALLIGA AQILWMDVPD HAAVDLSVRL
VQSDRRAAKY AGLVNAVLRR CAREGQPLID EVRSEALDIP PWLMTRWIAN YGENTAKAIA
TAISHEPSLD LTVKAGAAQW ATRLHGEVLP TGTVRTALQG PVTMLPGFSE GRWWVQDAAA
ALPARLFGDL QGRRVADLCA APGGKTAQLA QAGAEVTAID RSPNRVARLR DNLGRLSLGA
RALVADAVEW QDDAAGSGFD GVLVDAPCSS TGTIRRHPDV AWLKQDSDIA ALTALQKRLL
QKAFALLKPG GTLVYCTCSL EPEEGEHLVG ALLASEAGVR RVPIGAAEVA GLEDIVTPAG
DLRTLPCHLP HDDPRLSGLD GFYAARLIKS
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