Gene Nham_0196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0196 
Symbol 
ID4030656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp218922 
End bp220676 
Gene Length1755 bp 
Protein Length584 aa 
Translation table11 
GC content69% 
IMG OID637968732 
Productheparinase II/III-like 
Protein accessionYP_575557 
Protein GI92115828 
COG category[S] Function unknown 
COG ID[COG5360] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.9561 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGGTCG CTTATCGCAG ACGCATTTCA ACGCTGTTGC TCCGCCGCTT CGCGCGACGA 
ACGATCGCGC GCGCCGGCGA CGGCCCGGCG GCGCTGTCGC GGCTGTGGCC CGGCCGCGCC
GACCGGCTGA CGATCGCACC GCACGACCTG CGCACCGCCG ACGGTACCCG CGCCGCCGAG
ATCTACGCCG GCCGCTTCGT GTTCGCGGGC AAGATCGTCA CCTGCCATTC CCGCTCGATC
TTCGACCTCG AACCGCCATC CGAGGATTGG GAAGCTGCGC TACTGGGTTT CGGCTGGCTG
CGGCATCTGC GCGCCGCCGA CACCGCGATC ACGCGCGCCA ATGCGCGATC GCTGGTCGAC
GACTGGATGT CGAATCCGGC GCGCAGGCGG CCGCTGGGGC GGCGCGCCGA CGTCATGGCC
CGCCGCGTTA TCTCGCTGTT GTCGCAGGCG CCGCTCGTGC TCAGCGATAC CGACGGGAAA
TTCTATCGCC GCTATCTGCG CGCGCTGGCC CGCGACATCC GCCTGTTGCG GTTCGGCCTG
CACGACGCGC CCGACGGCGT GGCGCGGCTC CAGGTTCTGA TCGCGCTGTG CTACGCCTCG
CTGTGTCTTG CCAACCAGGC CCGCACCATC CGCACCGCGA CGCGCAAGCT GTCCGACGAA
TTGCGGCGGC AGATCCTGCC CGACGGCGGC CATGTCTCGC GCAATCCCGG CGCCTTGATC
GAACTCTTGA TCGACCTGTT GCCGCTCCGG CAAACCTTCG CCGCGCGCAA CATCGCGCCG
CCGCCGGCCC TGCTGAACGC CATCGACCGC ATGATGCCGA TGCTGCGCTT CTTCCGTCAC
GGCGACGGCA GTTTTGCGCT GTTCAACGGC ATGAGCGGCG CGCCGTCGGA CCTTTTGGCG
ACGCTTCTGG CCTATGACGA CACCCGCGGC ATACCAATGG CCAGCATGCC GCACACCGGC
TTCCAGCGGC TCGACGCCGG CACGACGACG CTGATCGTCG ATACCGGACC ACCGCCGCCG
TCGAACCTCA GCGAGGAGGC GCATGCCGGC TGCCTGTCGT TCGAACTGTC CTCCGGCCCA
AACCGGATCG TGACCAATTG CGGCACGCCC TCGACCGGCC GCGACAACTG GCGCACCTTC
GCCCGCTCAA CGCCGGCGCA TTCCACACTG AGCTGCCATG AAACATCGTC GTGTCAGTTC
GTCGAACGGT CGGCGATGAA GCGGCTGCTA CAAGGCGCGC CGATCGTCAG CGGCCCGGCC
AATGTCGAAA GCTCCCGCGA GACCGTGGAC GAGGCCGAAC GGCTGACGGC GTCGCATGAC
GGCTATCTCG CCCGGTTCGG CGTGATCCAT CGCCGCGTTC TGACGATAAC GCGTGACGGC
TCCCGACTGG AGGGCGAGGA CACGCTGGCG CCCGCGCCCA GCGGCCGCAT GAAGGGCAGC
CGGATCGATT ACGCCTTGCG TTTCCATCTG CATCCGTCGG TCAAGGCGAG CCGCCTCAGC
GATGCGCGCG GGGTGATGCT GGTGCTGCCG AACCGCGAAG TCTGGACGTT CGAGGCGCCC
GACGACCGGG TCGACCTCGA AGACAGCGTG TTTCTCGCCG GCAACGACGG CCCCCGCCGC
ACCACGCAGA TCGTGATTCA TCAGAGTGCC CGGGAGGCCC CCACCGTGCG CTGGAGTTTG
GTCCGCTCGA CCGCCTCGGT CACGGCCACC AACGCCCGCC GCAATGCGCG GCGCGAGCCG
GAATTGCCGC TGTAG
 
Protein sequence
MSVAYRRRIS TLLLRRFARR TIARAGDGPA ALSRLWPGRA DRLTIAPHDL RTADGTRAAE 
IYAGRFVFAG KIVTCHSRSI FDLEPPSEDW EAALLGFGWL RHLRAADTAI TRANARSLVD
DWMSNPARRR PLGRRADVMA RRVISLLSQA PLVLSDTDGK FYRRYLRALA RDIRLLRFGL
HDAPDGVARL QVLIALCYAS LCLANQARTI RTATRKLSDE LRRQILPDGG HVSRNPGALI
ELLIDLLPLR QTFAARNIAP PPALLNAIDR MMPMLRFFRH GDGSFALFNG MSGAPSDLLA
TLLAYDDTRG IPMASMPHTG FQRLDAGTTT LIVDTGPPPP SNLSEEAHAG CLSFELSSGP
NRIVTNCGTP STGRDNWRTF ARSTPAHSTL SCHETSSCQF VERSAMKRLL QGAPIVSGPA
NVESSRETVD EAERLTASHD GYLARFGVIH RRVLTITRDG SRLEGEDTLA PAPSGRMKGS
RIDYALRFHL HPSVKASRLS DARGVMLVLP NREVWTFEAP DDRVDLEDSV FLAGNDGPRR
TTQIVIHQSA REAPTVRWSL VRSTASVTAT NARRNARREP ELPL