Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_0196 |
Symbol | |
ID | 4030656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 218922 |
End bp | 220676 |
Gene Length | 1755 bp |
Protein Length | 584 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637968732 |
Product | heparinase II/III-like |
Protein accession | YP_575557 |
Protein GI | 92115828 |
COG category | [S] Function unknown |
COG ID | [COG5360] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.9561 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCGGTCG CTTATCGCAG ACGCATTTCA ACGCTGTTGC TCCGCCGCTT CGCGCGACGA ACGATCGCGC GCGCCGGCGA CGGCCCGGCG GCGCTGTCGC GGCTGTGGCC CGGCCGCGCC GACCGGCTGA CGATCGCACC GCACGACCTG CGCACCGCCG ACGGTACCCG CGCCGCCGAG ATCTACGCCG GCCGCTTCGT GTTCGCGGGC AAGATCGTCA CCTGCCATTC CCGCTCGATC TTCGACCTCG AACCGCCATC CGAGGATTGG GAAGCTGCGC TACTGGGTTT CGGCTGGCTG CGGCATCTGC GCGCCGCCGA CACCGCGATC ACGCGCGCCA ATGCGCGATC GCTGGTCGAC GACTGGATGT CGAATCCGGC GCGCAGGCGG CCGCTGGGGC GGCGCGCCGA CGTCATGGCC CGCCGCGTTA TCTCGCTGTT GTCGCAGGCG CCGCTCGTGC TCAGCGATAC CGACGGGAAA TTCTATCGCC GCTATCTGCG CGCGCTGGCC CGCGACATCC GCCTGTTGCG GTTCGGCCTG CACGACGCGC CCGACGGCGT GGCGCGGCTC CAGGTTCTGA TCGCGCTGTG CTACGCCTCG CTGTGTCTTG CCAACCAGGC CCGCACCATC CGCACCGCGA CGCGCAAGCT GTCCGACGAA TTGCGGCGGC AGATCCTGCC CGACGGCGGC CATGTCTCGC GCAATCCCGG CGCCTTGATC GAACTCTTGA TCGACCTGTT GCCGCTCCGG CAAACCTTCG CCGCGCGCAA CATCGCGCCG CCGCCGGCCC TGCTGAACGC CATCGACCGC ATGATGCCGA TGCTGCGCTT CTTCCGTCAC GGCGACGGCA GTTTTGCGCT GTTCAACGGC ATGAGCGGCG CGCCGTCGGA CCTTTTGGCG ACGCTTCTGG CCTATGACGA CACCCGCGGC ATACCAATGG CCAGCATGCC GCACACCGGC TTCCAGCGGC TCGACGCCGG CACGACGACG CTGATCGTCG ATACCGGACC ACCGCCGCCG TCGAACCTCA GCGAGGAGGC GCATGCCGGC TGCCTGTCGT TCGAACTGTC CTCCGGCCCA AACCGGATCG TGACCAATTG CGGCACGCCC TCGACCGGCC GCGACAACTG GCGCACCTTC GCCCGCTCAA CGCCGGCGCA TTCCACACTG AGCTGCCATG AAACATCGTC GTGTCAGTTC GTCGAACGGT CGGCGATGAA GCGGCTGCTA CAAGGCGCGC CGATCGTCAG CGGCCCGGCC AATGTCGAAA GCTCCCGCGA GACCGTGGAC GAGGCCGAAC GGCTGACGGC GTCGCATGAC GGCTATCTCG CCCGGTTCGG CGTGATCCAT CGCCGCGTTC TGACGATAAC GCGTGACGGC TCCCGACTGG AGGGCGAGGA CACGCTGGCG CCCGCGCCCA GCGGCCGCAT GAAGGGCAGC CGGATCGATT ACGCCTTGCG TTTCCATCTG CATCCGTCGG TCAAGGCGAG CCGCCTCAGC GATGCGCGCG GGGTGATGCT GGTGCTGCCG AACCGCGAAG TCTGGACGTT CGAGGCGCCC GACGACCGGG TCGACCTCGA AGACAGCGTG TTTCTCGCCG GCAACGACGG CCCCCGCCGC ACCACGCAGA TCGTGATTCA TCAGAGTGCC CGGGAGGCCC CCACCGTGCG CTGGAGTTTG GTCCGCTCGA CCGCCTCGGT CACGGCCACC AACGCCCGCC GCAATGCGCG GCGCGAGCCG GAATTGCCGC TGTAG
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Protein sequence | MSVAYRRRIS TLLLRRFARR TIARAGDGPA ALSRLWPGRA DRLTIAPHDL RTADGTRAAE IYAGRFVFAG KIVTCHSRSI FDLEPPSEDW EAALLGFGWL RHLRAADTAI TRANARSLVD DWMSNPARRR PLGRRADVMA RRVISLLSQA PLVLSDTDGK FYRRYLRALA RDIRLLRFGL HDAPDGVARL QVLIALCYAS LCLANQARTI RTATRKLSDE LRRQILPDGG HVSRNPGALI ELLIDLLPLR QTFAARNIAP PPALLNAIDR MMPMLRFFRH GDGSFALFNG MSGAPSDLLA TLLAYDDTRG IPMASMPHTG FQRLDAGTTT LIVDTGPPPP SNLSEEAHAG CLSFELSSGP NRIVTNCGTP STGRDNWRTF ARSTPAHSTL SCHETSSCQF VERSAMKRLL QGAPIVSGPA NVESSRETVD EAERLTASHD GYLARFGVIH RRVLTITRDG SRLEGEDTLA PAPSGRMKGS RIDYALRFHL HPSVKASRLS DARGVMLVLP NREVWTFEAP DDRVDLEDSV FLAGNDGPRR TTQIVIHQSA REAPTVRWSL VRSTASVTAT NARRNARREP ELPL
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