Gene Nham_0194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0194 
Symbol 
ID4030654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand- 
Start bp216325 
End bp216987 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content64% 
IMG OID637968730 
Productcytochrome c, class I 
Protein accessionYP_575555 
Protein GI92115826 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATCGC TGGTAGGCGC AGCACTGCTG CTTCTTGGCA TGTCGGCGCT GCCGGTGCTT 
GCGGCGGATG GGAAGGACAT CACCGCGAGA GGGACGCCGG ACAGAGCGGC ATCCTGCTCA 
CCGTGTCATG GCCAGAATGG ACAGGGCCAG CCGGCAACGG GCGTGCCGCG TCTTGCGGGT 
CTCAACGCGC AGTACTTCGA ACGTCAGCTT GAGAGTTTCA AGGACGGCAC GCGCAAGAAC 
CGTATCATGC TGATGATCGC GTCGGACCTG ACGGACGGCG AAAGAAAAGC GCTAGCGAAT 
TATTATGCCG ACATGGCGAC GCCGAAGCCC GAGACCGCGC CGGCTGACCC GGCCGTGATC 
GCGGCCGGAG CGAAGCTCGC CGCGACCGGC GACTGGTCGA AAGACCTGCC CGGATGCGGA 
CAGTGCCACG GGGCCGCCGG CCTTGGCGTC GGAACGGACT TTCCACGCCT CGCGGGGCAA 
TGGGCCGTCT ATATCGAGAA AGCACTTCGG TCGTGGAAGG CCGGCGATCG CAAGAACGAT 
CCCATGGGCG TGATGGCCAA TGTCGCCAAC AAGCTGACCG ACGACCAGAT CAAGAGCGTC 
GCCGCCTATT ACGAGAGCCT GCCGGTGGCG GCACCAGTCC ATAACCCGGA CAACAAGCCA 
TGA
 
Protein sequence
MRSLVGAALL LLGMSALPVL AADGKDITAR GTPDRAASCS PCHGQNGQGQ PATGVPRLAG 
LNAQYFERQL ESFKDGTRKN RIMLMIASDL TDGERKALAN YYADMATPKP ETAPADPAVI 
AAGAKLAATG DWSKDLPGCG QCHGAAGLGV GTDFPRLAGQ WAVYIEKALR SWKAGDRKND 
PMGVMANVAN KLTDDQIKSV AAYYESLPVA APVHNPDNKP