| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0172 |
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| Symbol | |
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| ID | 4029329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 193196 |
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| End bp | 193792 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637968707 |
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| Product | sigma 54 modulation protein/ribosomal protein S30EA |
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| Protein accession | YP_575533 |
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| Protein GI | 92115804 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.169374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACTTC GAATCTCGGG CAAGAGCATC AATGTCGGCG AGGCGCTGCG CGGGCGCCTC
AACAGTCGCA CCGACGAAGT TCTCCGAAAA TATTTTGACG GAAAATATTC TGGCCACATC
ACGCTGTGCA AGGACGGCTT CGGATTCCGC ACCGACTGCG CGCTGCATCT GGATTCCGGA
GTGACGCTCG AAGCCGAATC CAACGCCGCG GATGCCTATG CGAGCGCAGA CCAGGCACTG
TTGCAGATCG AGAAGCGACT GCGCCGTTAC AAGAGCCGCC TCAAGGATCG CTCGGCCCGC
AAGATCCACG CCACGACGGA AGCGGTCGCC GTGCTCGACG CGCCGAGTTA CGTCATCGAG
GCGCCGAACG TGGACGGTGA AGACGAGGTC ACCGCCTTCA ATCCGGTCAT CATCGCGGAA
GCCATCACAT CGCTGAGGCG GCTTTCGGTC AGCGAAGCGG TGATGGAACT CGATTTCACC
GGCGTGCCGG TGCTGGTTTT CCAGCATGGC TCCAGCGGCC GCGTGAACGT GATCTATCGC
AGGCCAGACG GCAATGTGGG CTGGATCGAC CCGCCGGCGG TGAACGGCTC TGCATGA
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| Protein sequence | MTLRISGKSI NVGEALRGRL NSRTDEVLRK YFDGKYSGHI TLCKDGFGFR TDCALHLDSG
VTLEAESNAA DAYASADQAL LQIEKRLRRY KSRLKDRSAR KIHATTEAVA VLDAPSYVIE
APNVDGEDEV TAFNPVIIAE AITSLRRLSV SEAVMELDFT GVPVLVFQHG SSGRVNVIYR
RPDGNVGWID PPAVNGSA
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