| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0160 |
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| Symbol | |
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| ID | 4029316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 180499 |
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| End bp | 181443 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637968694 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_575521 |
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| Protein GI | 92115792 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0350] Methylated DNA-protein cysteine methyltransferase
[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | [TIGR00589] O-6-methylguanine DNA methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCTGCGA CACAGCCGCC GCCTTACATT CGTGTCATGA TGACGTTTGC AAAAAGCTTC
GCCCCGAATG ATCCACGCCT CACGCTGCCG GGCGCAGAAA GTGCCGCGCT GCGCGACTAC
GATGCGGTGC GGCGCGCGAT CGCTTTTATC TCGGCAAACT GGCGCACGCA GCCGACCATT
GCAGCGATAG CCGACGCCGC CGGCGTGGCG CCGGATGAAC TGCATCATCT TTTCCGCCGC
TGGGCGGGCC TGACGCCGAA AGCCTTCATG CAGGCGCTGA CGCTCGACCA CGCCAGGGGG
CTATTGCGCA AGTCCGCCAG CGTGCTCGAC GCCGCCCTCG ACTCCGGCCT CTCAGGTCCG
GGTCGCTTGC ACGACCTGTT CGTCACGCAC GAGGCGATGT CCCCCGGCGA ATGGAAAAAC
GGCGGCGCCG GCATGAGGCT GGCTTTCGGT TTTCACCCCT CGCCGTTCGG CACCGCGATC
GTGATCGCCA GCAGCCGCGG CCTCGCGGGA CTCGCTTTCG CCGACGCCGG CGAGGAGCAG
ACCGCGCTGG CCGATATGAA ACGGCGCTGG CCCAACGCAA CCTACGTCGA GGATCACGCC
GGAACGGCGG CGCTTGCGCA GCGCGTGTTC GATACAAAAC TCTGGCGGCC GGATCAGCCG
TTGCGTGTGG TTCTGATCGG GACGGATTTC GAGGTGCGGG TCTGGGAGAC CCTGCTCAGG
ATTCCCATGG GCAAGGCCAC GACCTATTCA AGCATCGCCG CCAACGTAAA CAGCCCGAAA
GCCTCGCGCG CCGTCGGCGC CGCGGTCAGC AAGAACCCGG TGTCGTTTGT CGTTCCCTGC
CATCGCGTGA TCGGCAAGAG CGGCGCACTG ACCGGCTATC ACTGGGGCAT CACCCGCAAG
CAGGCGATGC TGGGTTGGGA AGCCGGGCAG GTCGGCGTCG AGTAG
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| Protein sequence | MAATQPPPYI RVMMTFAKSF APNDPRLTLP GAESAALRDY DAVRRAIAFI SANWRTQPTI
AAIADAAGVA PDELHHLFRR WAGLTPKAFM QALTLDHARG LLRKSASVLD AALDSGLSGP
GRLHDLFVTH EAMSPGEWKN GGAGMRLAFG FHPSPFGTAI VIASSRGLAG LAFADAGEEQ
TALADMKRRW PNATYVEDHA GTAALAQRVF DTKLWRPDQP LRVVLIGTDF EVRVWETLLR
IPMGKATTYS SIAANVNSPK ASRAVGAAVS KNPVSFVVPC HRVIGKSGAL TGYHWGITRK
QAMLGWEAGQ VGVE
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