Gene Nham_0155 details

Gene Information

• Locus tag: Nham_0155
• Symbol: dnaK
• ID: 4029311
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: +
• Start bp: 174596
• End bp: 176494
• Gene Length: 1899 bp
• Protein Length: 632 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637968689
• Product: molecular chaperone DnaK
• Protein accession: YP_575516
• Protein GI: 92115787
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGAAAGG TCATCGGGAT TGACCTCGGC ACCACGAATT CGTGCGTGGC CGTAATGGAC 
GGCAAGACGC CGAAAGTCAT CGAAAACGCG GAAGGGATGC GGACTACGCC GTCCATCGTC 
GCCTTTAGCG ATGACGGTGA GCGCCTCGTC GGGCAGCCGG CCAAGCGCCA GGCCGTGACC 
AATCCCGAGC GGACCATTTT TGCTGTCAAG CGCCTGATTG GCCGCCGTTA CGATGATCCC 
ACGGTCGAAA AGGACAAGCA CCTCGTCCCT TACAAGATCG CGAAAGCCGG CAACGGCGAC 
GCCTGGGTCG AGGTCGACGG CAAGACCTAT TCGCCTTCGC AGATTTCGGC CTTCACGCTT 
CAGAAGATGA AGGAGACCGC CGAGGCCCAT CTCGGTCAGA AGGTCGATCA GGCCGTTATC 
ACGGTTCCCG CCTATTTCAA CGACGCACAA CGTCAGGCCA CCAAAGACGC CGGCAAGATC 
GCCGGCCTCG AAGTGCTGCG CATCATCAAC GAGCCGACCG CGGCCGCGCT GGCCTATGGC 
CTCGACAAGG CTAAGCAAGG CACCATCGCC GTGTATGATC TCGGCGGCGG CACGTTCGAC 
GTGTCGATCC TCGAGATCGG CGACGGCGTG TTCGAGGTAA AGTCGACCAA CGGCGATACG 
TTCCTTGGCG GCGAAGACTT CGACATGCGC CTGGTCAGCT ATCTGGCCGA CGAGTTCCAG 
AAGGAGCAGG GCATCAACCT GCGCAACGAC AAGCTGGCCT TGCAGCGGTT GAAGGAAGCT 
GCCGAGAAGG CCAAGATCGA GCTGTCGTCG ACCACCCAGA CCGAAATCAA CCTGCCGTTT 
ATCACGGCCG ACCAGTCCGG CCCGAAGCAT CTGACGATGA AGCTCACCCG CGCCAAGTTC 
GAGGCGCTGG TCGATGATCT CGTCCAGAAG ACCATTGAGC CGTGCCGCAA GGCGCTGAAG 
GATGCCGGCC TGACGGCGGG CGAGATCGGC GAAGTGGTGC TGGTCGGCGG CATGACGCGC 
ATGCCGAAGG TCCAGGAAGT CGTCAAGCAG TTGTTCGGCA AGGAGCCGCA CAAGGGCGTC 
AACCCGGACG AGGTTGTCGC GATTGGCGCG GCGATCCAGG CCGGCGTCCT GCAGGGCGAC 
GTCAAGGACG TGCTGCTGCT CGACGTTACC CCGCTCTCGC TCGGCATCGA GACGCTGGGC 
GGCGTGTTTA CCCGCATCAT CGATCGCAAC ACCACGATCC CGACCAAGAA GAGCCAGGTA 
TTCTCGACGG CCGAGGACAG CCAGAACGCC GTCACCATCC GCGTCTTCCA GGGCGAGCGC 
GAAATGGCGG CCGACAACAA GATCCTCGGC CAGTTCGATC TGATGGGCAT TCCGCCGGCC 
CCGCGCGGCA TGCCGCAGAT CGAGGTGACG TTCGATATCG ACGCCAACGG CATCGTCAAC 
GTGTCGGCGA AGGACAAGGC GACAGGCAAG GAACAGCAGA TCCGCATCCA GGCCTCGGGA 
GGCCTGTCGG AGGCCGACAT CGACAAGATG GTCAAGGACG CCGAGGCGAA TGCGATCGAA 
GACAAGAAAC GCCGCGAGGC CGTCGACGCC AAGAACCATG CCGACTCGCT GGTCCACTCG 
ACCGAGAAGG CGCTCGCCGA GCACGGCTCG AAGATCGAGG ACAGCGAGCG CCGCGCCATC 
GAGGATGCCG TCAGCGATCT GAAGGAAGCG CTGAAGGGCG ACGACGCCGA GGCGATCAAG 
GCCAAGACCA ACACGCTGGC GCAGGCGTCC ATGAAGCTCG GCGAGGCCAT GTACAAGCAG 
CAGGCTGAAG CCGATGCGGC CAAGGACGCT GCGAAGGACG ATGTCGTCGA TGCGGAGTTT 
ACCGAGGTCG ACGACGACAA GAACAAGAAG TCTGCTTAA 

 

Protein sequence

MGKVIGIDLG TTNSCVAVMD GKTPKVIENA EGMRTTPSIV AFSDDGERLV GQPAKRQAVT 
NPERTIFAVK RLIGRRYDDP TVEKDKHLVP YKIAKAGNGD AWVEVDGKTY SPSQISAFTL 
QKMKETAEAH LGQKVDQAVI TVPAYFNDAQ RQATKDAGKI AGLEVLRIIN EPTAAALAYG 
LDKAKQGTIA VYDLGGGTFD VSILEIGDGV FEVKSTNGDT FLGGEDFDMR LVSYLADEFQ 
KEQGINLRND KLALQRLKEA AEKAKIELSS TTQTEINLPF ITADQSGPKH LTMKLTRAKF 
EALVDDLVQK TIEPCRKALK DAGLTAGEIG EVVLVGGMTR MPKVQEVVKQ LFGKEPHKGV 
NPDEVVAIGA AIQAGVLQGD VKDVLLLDVT PLSLGIETLG GVFTRIIDRN TTIPTKKSQV 
FSTAEDSQNA VTIRVFQGER EMAADNKILG QFDLMGIPPA PRGMPQIEVT FDIDANGIVN 
VSAKDKATGK EQQIRIQASG GLSEADIDKM VKDAEANAIE DKKRREAVDA KNHADSLVHS 
TEKALAEHGS KIEDSERRAI EDAVSDLKEA LKGDDAEAIK AKTNTLAQAS MKLGEAMYKQ 
QAEADAAKDA AKDDVVDAEF TEVDDDKNKK SA