Gene Nham_0152 details

Gene Information

• Locus tag: Nham_0152
• Symbol: hrcA
• ID: 4029461
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: +
• Start bp: 171055
• End bp: 172143
• Gene Length: 1089 bp
• Protein Length: 362 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637968686
• Product: heat-inducible transcription repressor
• Protein accession: YP_575513
• Protein GI: 92115784
• COG category: [K] Transcription
• COG ID: [COG1420] Transcriptional regulator of heat shock gene
• TIGRFAM ID: [TIGR00331] heat shock gene repressor HrcA

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGTCCATC ACGATCCGAT TGGTCTGATT GCACCGAACA CCGGGTTGGC CCAGCTGAAC 
GAGCGATCGC GCGACATTTT TCGTCAGATC GTCGAGAGCT ATCTTGCGAC GGGTGAGCCC 
GTGGGCTCGC GCAACATTTC CCGCCTGATC ACGATGCCGC TCTCGCCGGC GTCGGTTCGC 
AATGTGATGT CGGACCTCGA ACAGCTCGGG CTGATTTATG CGCCGCATAC CTCCGCCGGG 
CGCTTGCCGA CTGAGTTCGG CCTGCGGTTC TTTGTCGATG CCTTGATGCA GGTCGGCGAC 
CTGACCGAGA CGGAGCGCCA GTCGATCCAG ACCCAGCTCG CGTCGGTCGG CAAGGCGCAA 
TCGGTCGAGG CCGCGCTGGA CCAAGCCTTG ACACGGCTGT CGGGATTGAC CCGGGCCGCG 
GCGGTGGTTC TGACGGCCAA ATCCAACGTG CGCTTGAAGC ATATCGAATT TGTCAGGCTG 
GAGCCGGAGA AGGCGCTCGT AGTGCTCGTT GCCGAAGACG GACAGGTCGA GAACCGTGTG 
CTGACGCTGC CGTCCGGCGT CCCGGCATCG GCGCTGACCG AAGCGTCGAA TTTCCTGAAT 
GCGCGAATCC GCGGGCGGAC GCTCGCCGAG GCGCGCCTCG AGCTCGAGAC GGCGCTGACG 
CAGAGCAAGG CGGAACTCGA TCAGCTCACC CAGAAGGTCA TCGCGGCCGG GATTGCGAGC 
TGGTCGGGCG GCGACAGCGA CGATCGGCAA CTGATCGTGC GCGGCCACGC CAATCTGCTG 
GAGGACCTGC ACGCGCTGGA GGATCTCGAG CGGGTGCGGC TGCTGTTCGA CGACCTCGAA 
ACCAAACGCG GCGTGATCGA CTTACTCGGC CGCGCCGAAC GCGCCGATGG CGTCCGCATC 
TTCATCGGTT CGGAAAACAA GCTGTTCTCG CTGTCCGGGT CCTCGACGAT CATCGCGCCC 
TACAACGACG GTGCCGGCCA TATCGTCGGC GTCCTCGGCG TGATAGGACC GACCCGGCTG 
AACTACGCGC GCGTGATCCC GATGGTGGAT TACGCGGCCC GCATTGTCAG CCAGATGCTC 
GGTGGCTGA 

 

Protein sequence

MVHHDPIGLI APNTGLAQLN ERSRDIFRQI VESYLATGEP VGSRNISRLI TMPLSPASVR 
NVMSDLEQLG LIYAPHTSAG RLPTEFGLRF FVDALMQVGD LTETERQSIQ TQLASVGKAQ 
SVEAALDQAL TRLSGLTRAA AVVLTAKSNV RLKHIEFVRL EPEKALVVLV AEDGQVENRV 
LTLPSGVPAS ALTEASNFLN ARIRGRTLAE ARLELETALT QSKAELDQLT QKVIAAGIAS 
WSGGDSDDRQ LIVRGHANLL EDLHALEDLE RVRLLFDDLE TKRGVIDLLG RAERADGVRI 
FIGSENKLFS LSGSSTIIAP YNDGAGHIVG VLGVIGPTRL NYARVIPMVD YAARIVSQML 
GG