Gene Nham_0151 details

Gene Information

• Locus tag: Nham_0151
• Symbol: rph
• ID: 4029460
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: -
• Start bp: 170161
• End bp: 170874
• Gene Length: 714 bp
• Protein Length: 237 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637968685
• Product: ribonuclease PH
• Protein accession: YP_575512
• Protein GI: 92115783
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0689] RNase PH
• TIGRFAM ID: [TIGR01966] ribonuclease PH

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGACCTA GCCGTCGTGC ACCGGATGAA CTGCGCGCCG TGTCGCTGGA ACGTGGCGTC 
GTCAAATACG CCGAGGGTTC CTGCATGGTG AAATTCGGCG ACACCCACGT GCTGGTGACC 
GCGACCCTGG AGGAGCGGCT GCCGCCGTGG CTCAAGGGCC AGGGCCGCGG CTGGGTCACG 
GCCGAATACG GAATGCTGCC GCGCGCCACG CTGGAGCGGA CGCGGCGCGA GGCCTCCGCC 
GGCAAGCAGG GCGGCCGTAC CGTCGAAATC CAGCGCCTGA TCGGCCGCTC GTTGCGCGCC 
GCAGTCGACC TCGAGGCGCT GGGCGAGCGC CAGATCACGG TGGATTGCGA TGTGATTCAG 
GCCGACGGCG GCACCCGCAC CGCGTCGATC ACCGGCGCGT GGGTCGCGCT GGCCGACTGC 
ATCGGCTGGA TGAAGGCCCG CAACATGATC AAGACCAGCG TGCTTCGCGA CAACGTCGCG 
GCGGTCTCAT GCGGCATCTA CAACGGCACG CCCGTCCTCG ATCTGGACTA TGCGGAGGAT 
TCAGAAGCCG ACACCGACGC CAATTTCGTC ATGACCGGCG ACGGACGCAT CATCGAGGTG 
CAGGGAACCG CCGAGAAGAC ACCGTTCTCG CAGGATGAAT TTCTCGCGCT GCTGGCGCTC 
GCGAAAAAAG GGGTCGCGCG GCTGGTGGAT TTGCAGAAAA TGGCGGTGGC GTGA 

 

Protein sequence

MRPSRRAPDE LRAVSLERGV VKYAEGSCMV KFGDTHVLVT ATLEERLPPW LKGQGRGWVT 
AEYGMLPRAT LERTRREASA GKQGGRTVEI QRLIGRSLRA AVDLEALGER QITVDCDVIQ 
ADGGTRTASI TGAWVALADC IGWMKARNMI KTSVLRDNVA AVSCGIYNGT PVLDLDYAED 
SEADTDANFV MTGDGRIIEV QGTAEKTPFS QDEFLALLAL AKKGVARLVD LQKMAVA