Gene Nham_0119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0119 
Symbol 
ID4029561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand+ 
Start bp137593 
End bp138183 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content68% 
IMG OID637968653 
ProductSmr protein/MutS2 
Protein accessionYP_575480 
Protein GI92115751 
COG category[S] Function unknown 
COG ID[COG2840] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.174044 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGGT TGCCCCCTCG AATATCGGAT CTGCCAGCGC CGTCGCGGCG TCGGCGTGCG 
TTGACCGGCG AAGAGCGCGA ATTATGGGAA AGCGTCGCGA AACAAGCAAA GCCGCTGCGG 
AAAACGGCCC GGCTCTGGAC GTCGCTGGAA GGGGCTTTGT CCGGCGCGCC CGACCCGGCC 
CGCGAAGCGG CAGCGAAAGC CGTTGCAGTC GCGCCAGCGA ACCTCAAACC TTCAAGACCG 
GTACCGCCGC CATTGACGCT GCTCAGCCGG CGCGAGCGCG CGCGATTGTC ACGTGGCAAA 
CAGGATATCG AGGCGCGGAT CGATCTGCAC GGCATGACGC AGGCCCGCGC CCATCGGGCG 
CTGCACAACT TTCTGCTGCG CGCCAGCGGC GACGGCCTGC GGTTTGTCCT CGTCATCACC 
GGCAAGGGCC GGGCGGCTGG TCTCGACCCC AGCCGCGGCA TCCTGCGCCA GCAGGTCCCG 
GAATGGCTCG GGCTTCCCGA GTTTCGCACG CTCGTGGTGG GATTCGAACA GGCCCATATC 
GGCCACGGCG GCGAAGGCGC GCTTTATGTG CGTGTGCGGC GGCGCCGTTA G
 
Protein sequence
MKRLPPRISD LPAPSRRRRA LTGEERELWE SVAKQAKPLR KTARLWTSLE GALSGAPDPA 
REAAAKAVAV APANLKPSRP VPPPLTLLSR RERARLSRGK QDIEARIDLH GMTQARAHRA 
LHNFLLRASG DGLRFVLVIT GKGRAAGLDP SRGILRQQVP EWLGLPEFRT LVVGFEQAHI 
GHGGEGALYV RVRRRR