Gene Nham_0118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0118 
Symbol 
ID4029560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp136094 
End bp137596 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content63% 
IMG OID637968652 
ProductMltA 
Protein accessionYP_575479 
Protein GI92115750 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2821] Membrane-bound lytic murein transglycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0425257 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAGGT GCGCCGTCGG ATTTTGCGTG GCCGCCGCGC TTGTGCCTGT CGCGGTCGAA 
GCTCATGACA CCCGTCATCG TCCGGCCTGG CCGCTCGAGA TCGCGGGCGG CCAATATATA
CCGGTCTCAT GGGCCGAGAT CGCCGGCTGG AACGACGACA ATCATCTTGA TGCATTCAAG
GCTTTTCGCG CGAGCTGCCG TGCGGTCACC GCACGACGGA TCTCGGCCGT CGGCCAGAAG
GCGCTCGGCA CATCATTGCG AGAGCCGTGC CGCGTCGCGA AGATGGCGGC TATATCGGAC
GATGCCAAAG CCCGCGCCTT CTTCGAAACC CGTTTCCGGG CGGTGCGAAT TTCACGTCTC
GGCGAAACCG ACGGCTTTGT CACCGGCTAT TACGAGCCGA TCATCGACGG ATCGCGCACC
AGGACGGATA CCTACACCGT GCCGGTTTAT CGGCGTCCCT CGAATCTTTT CGTCCGGGGG
TTCACGCAGG GCGCACCGAG CCTGCCGAAC AGCGGGCCGG TGTATCGCAA GATCGGCCGC
CGAAAGCTGG TGCCCTACTA TGATCGCGCT GAAATCGAGG ATGGCGCGAT CGCGGGCCGC
GGCCTCGAAA TCTGCTGGCT CAAGAGCCAG ACCGATCTGC TCTTCACGCA AATCCAAGGC
TCCGCGCGAG TTCGGCTCGA GGATGGCTCG ACCATACGCA TCAACTACGA TTCCTATAAC
GGATATCCCT ATACCGCGGT CGGTCGTATC CTGATCGAGC GCAACATCGT CCCGAAAGAT
CAGATGTCGA TGCAACGCAT CAGGCAGTGG ATGAATGAGA ACCCGGATGG CGCTATCGAG
CTGCGCCGCC AGAACCGGTC ATATGTCTTC TTCCGCGAGG TGAAGCTTTC GGACAACGAC
GAGGCGGTCG GTGCACAGGG CGTGCCGCTG GCGCCGGGCC GGTCGATCGC GGTCGATAAA
TCGCTACATG TCTACGGCAC GCCATTCTTC ATCGAAGGCG AATTGCCGAT CGAATCCGAG
CAGGCGAAAA CGCCGTTCCA TCGACTGATG ATCGCGCAGG ATACCGGCTC GGCGATTCTT
GGTCCGGCCC GCGCGGACCT TTACTTCGGC GCAGGTCCGG AAGCGGGGCG CGTGTCGGGC
CGCCTGCGGC ACAATATGCA GTTCGTGATG CTGGTTCCGA ACAGCCTCGA TCCCGTCGCC
CGCGGCAGAA CCATGCCGCT TCCGGAAACC CGGCCGTCGG CAAGGATCGC AAAACTGTTT
CCGCAGAAGA AGAACCAGAA GCCGGACGAT CCCAAGGTCG CCCCACAGCA GTCTGCACCG
TCCGCGGTCG TCCCGGCGGG CCAGCCGGCC AGGGCTGCTC TCGTGTCCGC GGCGAAAGCT
GCGCCGCCAG AAGCCGTTCC GCTCCCGGCA GTTCGGCCCG AAGTGATGCC CGGTCCCCAT
CAAGCGCGAC GTCACTATCA TCGCCGCCAC CATCGTCATG AGCGACGTCG TAACCCACGA
TGA
 
Protein sequence
MKRCAVGFCV AAALVPVAVE AHDTRHRPAW PLEIAGGQYI PVSWAEIAGW NDDNHLDAFK 
AFRASCRAVT ARRISAVGQK ALGTSLREPC RVAKMAAISD DAKARAFFET RFRAVRISRL
GETDGFVTGY YEPIIDGSRT RTDTYTVPVY RRPSNLFVRG FTQGAPSLPN SGPVYRKIGR
RKLVPYYDRA EIEDGAIAGR GLEICWLKSQ TDLLFTQIQG SARVRLEDGS TIRINYDSYN
GYPYTAVGRI LIERNIVPKD QMSMQRIRQW MNENPDGAIE LRRQNRSYVF FREVKLSDND
EAVGAQGVPL APGRSIAVDK SLHVYGTPFF IEGELPIESE QAKTPFHRLM IAQDTGSAIL
GPARADLYFG AGPEAGRVSG RLRHNMQFVM LVPNSLDPVA RGRTMPLPET RPSARIAKLF
PQKKNQKPDD PKVAPQQSAP SAVVPAGQPA RAALVSAAKA APPEAVPLPA VRPEVMPGPH
QARRHYHRRH HRHERRRNPR