Gene Nham_0117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0117 
Symbol 
ID4029559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp135379 
End bp136083 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content57% 
IMG OID637968651 
Productimport inner membrane translocase, subunit Tim44 
Protein accessionYP_575478 
Protein GI92115749 
COG category[S] Function unknown 
COG ID[COG4395] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0729784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATATTT ACACCATCAT TTTCCTGGCG CTGGCGGTTT TTATCTTCCT GCGTCTGCGC 
AGCGTCCTAG GACAGCGCAC AGGAAGTGAG CGTCCGCCTT ACGACCGTGC TACGCGGGAA
GTCCTGCATG GTACGCAGGA CAAGAACGTT GTCCCGATGG CAGGTCCCGT GATCGATCAG
GCGTCGTCGG CGCCCACGGC CGATGCGGCG TCCACCCCCG ATCGCTGGAA AAATCTGGCC
GAGCCCGGCA CGCCCCTCGC CCTCGGACTC GATGCCATTG CGGCTCATGA TTCGTCCTTC
GATCCGAAGC ATTTCATCAG CGGCGCACGT AGTGCCTATG AGATGATCGT ACTGGCATTC
GCCAACGGGG ATCGCCGGAC TTTGAAGGAT CTTCTGTCGT CGGACGTCTA TGAAAGCTTT
GATGCCGCCA TCAAGGATCG GGAGAAACTC GAACAGAAAA CGGAAACGCG ATTTGTCTCA
ATCGACAAGG TCGAGTTGAT CGGTGCGGAA TTGAGGGATA GTGCGGAGCA ATTGACCGTT
CGTTTCATTT CGCAGATGAT TTCGATGACC CGCGACAAGA CCGGAGCAAT CGTCGACGGA
AATCCTGAGA AGATTTCCGA TATCACCGAT GTTTGGACGT TTGCCCGCGA TATCCCTTCG
CGCGATCCGA ACTGGAAACT GGTTGGCACC GGCAGCACCG ACTGA
 
Protein sequence
MDIYTIIFLA LAVFIFLRLR SVLGQRTGSE RPPYDRATRE VLHGTQDKNV VPMAGPVIDQ 
ASSAPTADAA STPDRWKNLA EPGTPLALGL DAIAAHDSSF DPKHFISGAR SAYEMIVLAF
ANGDRRTLKD LLSSDVYESF DAAIKDREKL EQKTETRFVS IDKVELIGAE LRDSAEQLTV
RFISQMISMT RDKTGAIVDG NPEKISDITD VWTFARDIPS RDPNWKLVGT GSTD