Gene Nham_0111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0111 
Symbol 
ID4029612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp130647 
End bp131066 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content52% 
IMG OID637968645 
Producthypothetical protein 
Protein accessionYP_575472 
Protein GI92115743 
COG category[S] Function unknown 
COG ID[COG1981] Predicted membrane protein 
TIGRFAM ID[TIGR00701] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.137476 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACGAAT GGATCAAAGC GTTTCATGTG ATTGCCGTCA TTTCCTGGAT GGCGGGGATG 
CTCTACCTGC CAAGGCTGTT CGTTTATCAC TGCGATGCAG AGGTTGGCTC GAAGCAATCC
GAGACGTTCA AGGTTATGGA ACGGCGGCTC TTCAAGGCGA TCATCAATCC CGCGATGATG
GTGGCCTGGG GGCTCGGGCT TTATATGATG TGGGCGCACC ATTGGTATTC GGTGGGCTGG
TTTCAAGGAA AGCTGGCGCT CGTGATCCTG ATGTCCGCCA TTCACGGATA TTTCGCCCGC
CGCGTACGGG ATTTCGCCGC CGACCGGAAT GTGATGAGTC AAAGATTCTA TCGTATTATC
AATGAGGTAG TGACAGTACT GATGGTCGGT ATCGTTATTC TGGTTATCGT CAAGCCTTAA
 
Protein sequence
MYEWIKAFHV IAVISWMAGM LYLPRLFVYH CDAEVGSKQS ETFKVMERRL FKAIINPAMM 
VAWGLGLYMM WAHHWYSVGW FQGKLALVIL MSAIHGYFAR RVRDFAADRN VMSQRFYRII
NEVVTVLMVG IVILVIVKP