Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_0062 |
Symbol | trpA |
ID | 4029638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 74164 |
End bp | 75000 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637968595 |
Product | tryptophan synthase subunit alpha |
Protein accession | YP_575423 |
Protein GI | 92115694 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0159] Tryptophan synthase alpha chain |
TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCACCC GCATCGACAC GCGTTTTGCC GAACTGAAAA AGCAGGGCCG TTCGGCCTTC GTTACCTTTC TGATGGGCGG CGACCCGGAC CCCGCGACCT CGCTCGCCAT CATCAAGGCG CTGCCGAAGG CCGGCGCCGA CATCATTGAA ATCGGAATGC CCTTCACCGA TCCGATGGCG GACGGTCCGG CGGTCCAGGC CGCCGGCCGT CGCGCGCTCA ATGCGGGCAT GACCGTGACC AGGACGCTGC AGATGATCCA CGACTTCCGC AAAGGCGAGG GTTCGACGCC GGTCGTGCTG ATGGGCTATT ACAACCCGAT CTACATCTAT GGCGTCGAGA AGTTTCTCAC CGATGCGAAG GCTGCCGGCG TCGACGGCCT CATCGTCGTC GATCTGCCGC CGGAGGAAGA CTCCGAGCTG TGCATCCCGG CGATGAAGGC CGGGCTGAAC TTCATTCGCC TCGCGACACC GACCACCGAC GACAAGCGGC TGCCGGCGGT GCTCGCGAAT ACGTCCGGCT TCGTTTACTA CGTTTCCATC ACCGGGATCA CCGGCAGTGC GGCGGCGGAT TCGACAGCCG TCGGCGCGGC CGTTGCCCGC ATCAAGCGCC ATACCACTTT GCCGGTTTGC GTCGGCTTCG GCATCCGCAC CGCCGATGCC GCGCGCGGCA TCGCCGAGCG CTCCGACGGC GCGGTGGTCG GCTCGGCGCT GGTCGACGCC CTCAGCGGCA GCCTCGACGC TGAGGGCAAG GCGACGGCCA AAACGGTTAA CGCGGTCGCC GATCTCGCGG CGGCGCTGGC CGCGGGCGTA CGGTCCGCCA GACAGGCAGC GGAATAG
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Protein sequence | MTTRIDTRFA ELKKQGRSAF VTFLMGGDPD PATSLAIIKA LPKAGADIIE IGMPFTDPMA DGPAVQAAGR RALNAGMTVT RTLQMIHDFR KGEGSTPVVL MGYYNPIYIY GVEKFLTDAK AAGVDGLIVV DLPPEEDSEL CIPAMKAGLN FIRLATPTTD DKRLPAVLAN TSGFVYYVSI TGITGSAAAD STAVGAAVAR IKRHTTLPVC VGFGIRTADA ARGIAERSDG AVVGSALVDA LSGSLDAEGK ATAKTVNAVA DLAAALAAGV RSARQAAE
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