Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_0057 |
Symbol | |
ID | 4029767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 64411 |
End bp | 67560 |
Gene Length | 3150 bp |
Protein Length | 1049 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637968590 |
Product | hypothetical protein |
Protein accession | YP_575418 |
Protein GI | 92115689 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3893] Inactivated superfamily I helicase |
TIGRFAM ID | [TIGR02786] double-strand break repair protein AddB, alphaproteobacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGTCC GCAACGTCCC CACGTCAGTG CCGTTTCTGC GCACCGTCAT CACCGCACTG GTCGACGGCG CACTGATCGA GGGGTTTCGC CCGCGCGCGC AGCCCGAGCG GCTCGCCGAG GCCACGCTCT ATCTGCCAAC CCGCCGCGCC GGCCGCATGG CGCGCGACAT CTTCCTCGAT GTGCTGAATG TCGATGCCGT GATCCTGCCG CGCATCGTCG CGCTTGGCGA TATCGACGAG GATGAACTGG CCTTTGCACA AGCGGCTTCG TCGGCGGAGG CGTTGCAACT GCCTCCGGCG CTCGACGGGC TGGCACGCCG CCTTGCGCTC GCGCAGCTCA TCGAAGCATG GGCGAGGCAG TTGAAGCCCG GCGACCCGGC GCAGGCGCCA CTCGTCCTCG GCGGCCCGGC CTCGACGCTG GCGCTTGCCG ACGACCTCGC GCGGCTGATG GACGACATGG CCACGCGCGG CGTGGACTGG CGCGCGCTCG ACGCCCTGGT GCCCGACGCG CTCGACAAAT ACTGGCAGCT CACGCTCGAT TTCCTGAAGA TCGCCCGGGA CTACTGGCCG GCTCATCTTG AGGAAGCCGG CCGGATCGAA CCGGCGGTGC GGCGCGACCG CCTGATCGAT GCCGAAGCCG CGCGTCTCGC CGCCCATCAT GGCGGGCCGG TGATCGCGGC CGGCTCCACC GGTTCGATGC CGTCGACCGC GAAACTGCTG CATGTCATCG CCAGGCTGCC GCACGGCGCG GTGGTGTTGC CGGGGCTTGA CACCGACCTC GATGACGAGG CGTGGCAACT GATCGGCGGC ATGAGGGACG GCAACGGCGC ATTCACCGCG CCGCCCGCCG CCGGCCATCC GCAGTTCGCG CTGCATGGAC TGCTCAGGCG CTTCGGCATC GCGCGCCGCG ACGTGGAAAC GCTCGGCGTT CCCGCGCCAT ACGGGCGCGA GATGCTGACG TCGGAGGCGA TGCGGCCATC CGAGGCGACG GCGCGGTGGC ACACGCGGCT TGCCGAGCCC GAGGTCGCGG AGAAAATCGC CGCCGGCATG AAGAACCTCG CGGTGATCGC CGCCGCCAAT CCGGAAGTGG AAGCGCTCAG CATCGCCGCC GCCATGCGCG AGGCGCGCGA ACTGAACAAG ACGGCGGCGC TGGTGACCTT CGACCGGGCG CTGGCGCGGC GGGTGATGGC CGCGCTCGGC CGCTGGAATC TGGCGTTCGA CGATTCCGGC GGCGACGCGC TGATGGACAC GCCTGCGGGA ATATTCGCGC GGCTCGTCGC AGGCACGGCC TGCAACGGCC TGGAGCCGCC GACGCTGTTG GCCTTGCTGA AGCATCCGCT GTGCCGGCTC GGCCGGGTGG CCGGCGGATG GTCGCGCGCC GTCGCGACGC TGGAGCTTGC GATCCTGCGC GGCACCCGGC CGCCGCCGGG CAGCAAGGGT TTGGCCGACG AGTTCGCGCG ATTTTGCGGC GAACTGGACA AGCTCGATCG CGGCGAGAGT TCGTCGCTGC ATCGCACCGA GCCCCGCGCA GCGCTGAAAC TCCATCGGCT TGACGAATCT CGCGCGTTGA TCGCGGCCTT GCGGGACGCG CTCGCGCCGC TCGAAGGCGA CGGCGCATCG AGGTCGGCGG ACTTCACCGC TTTCGCCGCA CAGCATCGCG AGGCGATCGA CGTGCTGTCG CGCGACGACC AAGGTGTTGC CGCCGCCTTC GAGGGTCAGC ACGGCCTTGC GCTCGCCGCC GCGTTCGATG ATTTGCGCAA GGCGGGCGAG CGCAGCGGTC TGACAGTCAA GATCGCCGAC TATCCCGAGG TGTTCGAGAC CGCGTTCGGC GACCGCATCG TGCGCCGGCC GCAGGCTACA GCGGCAAGCT TGAGGATCTA CGGTCCGCTC GAAGCGCGTC TCACCCAATG CGACCGCGTC ATCCTCGGCG GGCTCAATGA AAGCGTCTGG CCGCCCGCGC CGCCAAGCGA TCCCTGGCTC AGCCGCCCGA TGCGGCACGA ACTCGGGCTC GATCTTCCGG AGCGACGCAT CGGTCTTTCC GCGCACGACT TCGCGCAACT GCTCGGCGCC GATGATGTCA TCCTCAGTCA TGCCGCCAAG GCCGGCGGTT CGCCGGCGGT GGCCTCGCGC TTCCTGCACC GGCTCAAAGC CGTCGCCGGC CCGGAACGCT GGGCAACCGC GCTGCAAGCC GGCACGCGCT ACGTTCAATA CGCCGAAGCG ATCGACCGGC CGGAGCAGGT CACCCCCGTC GCCCAGCCCG AGCCAAAACC ACCGCGCGCG GCGCGGCCGA CGCGATTGTC GGTGACCGCG ATCGAGGACT GGCTGCGCGA CCCCTACACC ATCTATGCCA AACACATTCT GAAGCTCTTG CCGTTAGAGG CCGTCGATAT GCCGCTGTCG GCGGCCGATC GCGGCTCTGC GATCCACAAT TCGCTCGGCG ATTTCACCAA ACAATATCCA GCAGCCTTGC CGGAGAACCC CGCGGACGTG TTGCGCGCCA TCGGCGAGAG CCGTTTCGCG CCGCTGATGC AGCGGCCCGA AGCGCGCGCG CTGTGGTGGC CGCGCTTTCA ACGCATCGCG GCGTGGTTCG CGGAATGGGA ACAGTCGCGC CGGCCACAAC TTGAGACAAT CGATGCCGAG ATCCGCGGCG AGATTTCGAT TCCTGTCGCA AGCGATCGCA CATTCCATTT GTCGGCGCGC GCCGATCGCA TCGAGCATCT CGGCGACGGC CGCTTTACTA TCCTCGACTA CAAGACCGGC AGCCCGCCGA GCAGCAAGCA GGTGCGGCTC GGGCTGTCCC CGCAGCTCAC GCTGGAATCC GCGATCCTGC GCGAAGGCGG CTTCGAGGGC ATCCCGGCCG GCGCGTCGGT CAGCGAACTG GTCTATGTCC GGCTCAGCGG CAACAACCCG CCCGGCGAGC CGCTGCAAGT CAATCTCGAC AATGGCAAGA CCGACATGCA ATCGCCGGAT CAGGCCGCCG ATCGCGCCCT TGAAGAACTC AACGCCCTGA TCCGCGCTTT CGACAACGAG CAGCAGGGCT ATCCATCGCT GGACCTGCCG ATGTGGAAGA CGCGCTACGG CGCTTACGAC GATCTCGCCC GAATCAAGGA ATGGTCGGCG GCGGGCGGGT TGGGAATCGA GGAATGGTGA
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Protein sequence | MRVRNVPTSV PFLRTVITAL VDGALIEGFR PRAQPERLAE ATLYLPTRRA GRMARDIFLD VLNVDAVILP RIVALGDIDE DELAFAQAAS SAEALQLPPA LDGLARRLAL AQLIEAWARQ LKPGDPAQAP LVLGGPASTL ALADDLARLM DDMATRGVDW RALDALVPDA LDKYWQLTLD FLKIARDYWP AHLEEAGRIE PAVRRDRLID AEAARLAAHH GGPVIAAGST GSMPSTAKLL HVIARLPHGA VVLPGLDTDL DDEAWQLIGG MRDGNGAFTA PPAAGHPQFA LHGLLRRFGI ARRDVETLGV PAPYGREMLT SEAMRPSEAT ARWHTRLAEP EVAEKIAAGM KNLAVIAAAN PEVEALSIAA AMREARELNK TAALVTFDRA LARRVMAALG RWNLAFDDSG GDALMDTPAG IFARLVAGTA CNGLEPPTLL ALLKHPLCRL GRVAGGWSRA VATLELAILR GTRPPPGSKG LADEFARFCG ELDKLDRGES SSLHRTEPRA ALKLHRLDES RALIAALRDA LAPLEGDGAS RSADFTAFAA QHREAIDVLS RDDQGVAAAF EGQHGLALAA AFDDLRKAGE RSGLTVKIAD YPEVFETAFG DRIVRRPQAT AASLRIYGPL EARLTQCDRV ILGGLNESVW PPAPPSDPWL SRPMRHELGL DLPERRIGLS AHDFAQLLGA DDVILSHAAK AGGSPAVASR FLHRLKAVAG PERWATALQA GTRYVQYAEA IDRPEQVTPV AQPEPKPPRA ARPTRLSVTA IEDWLRDPYT IYAKHILKLL PLEAVDMPLS AADRGSAIHN SLGDFTKQYP AALPENPADV LRAIGESRFA PLMQRPEARA LWWPRFQRIA AWFAEWEQSR RPQLETIDAE IRGEISIPVA SDRTFHLSAR ADRIEHLGDG RFTILDYKTG SPPSSKQVRL GLSPQLTLES AILREGGFEG IPAGASVSEL VYVRLSGNNP PGEPLQVNLD NGKTDMQSPD QAADRALEEL NALIRAFDNE QQGYPSLDLP MWKTRYGAYD DLARIKEWSA AGGLGIEEW
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