| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0054 |
|---|
| Symbol | |
|---|
| ID | 4029764 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | + |
|---|
| Start bp | 61380 |
|---|
| End bp | 62903 |
|---|
| Gene Length | 1524 bp |
|---|
| Protein Length | 507 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637968587 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_575415 |
|---|
| Protein GI | 92115686 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0802] Predicted ATPase or kinase
[COG3178] Predicted phosphotransferase related to Ser/Thr protein kinases |
|---|
| TIGRFAM ID | [TIGR00150] ATPase, YjeE family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.885213 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGGC CGTCGACATT CGCAACCGCG CTCGCCAACG AGACCGCGAC CGCGCACCTG
ATGGCCGACC TCGCACTGCT GATCGGCCCC GGCGACGTCA TCACGCTGTC GGGCGATCTC
GGCGCGGGCA AGACCGCCGC CGCCCGCGCC ATGATCCGCT ATCTTGCCGG CGACGACACG
GTCGAGGTGC CGAGCCCGAC CTTCACGCTG GCGCAGCATT ACGATCTGCC GTGCTATCCG
CTGCTCCATG CCGATCTCTA TCGCATCAAT GGCCCCGGCG AACTCGAGGA GATCGGCCTT
GCGCCGCTGC CCGACGCCAC GGTGGTGCTG ATCGAATGGC CGGAGCGCGC CGCCGGCGCC
TTGCCCACTG ATCGCATCGA CATCGCCATC AGCCACCGCC CGGCGCTCGG ATCGGCTGCG
CGCGCCGCCG AAATCACCGG CTACGGCAAC GCCGCGGCGC AGGTCGCGCG GCTGGCGGCG
CTGCGGCGGT TTCTCGACGA CGCCGGATAT CTCGACGCCA CACGGCAGCA CATGGCGGGC
GATGCCTCGA CGCGCTCCTA TGCCCGGTTG ATCCGCAGCG ACGGCCGCTT CATCCTGATG
AACGCGCCGA GGCGGCCCGA CGGACCCGCG ATCCACGACG GCAAGTCCTA CAGCGCCGCA
GTTCACCTCG CCGAAGACGT GAAGCCCTTC GTCGCCATCG CGCGCGGCTT GCGCGACCAC
GGCTTTTCCG CGCCGGCGAT CCATCATGCC GATCTGGAGT CGGGATTCCT GATCACCGAA
GATTTCGGCA GTGCGGGCTT CGTCGAAGGC ACGCCGCCGG CGCCGATCGC CGAGCGCTAC
CAGGTCGCCA CCGACATGCT GGCGGCATTG CATTGCCGGA CGTTGCCCGA AATCCTCCCC
GTCGCGCCGC ATATCCCCTA CACCATTCCG GTGTTCGACA CCGAGGCGAT GCTGGTCGAG
GTGGGCCTGA TGCTGGACTG GTATCTGACC GACCGCGGCG TTGAGCCGAG CGACGATCTG
CGCGCGGAAT TCATGGCGAT GTGGCGCGTT TTGCTGGCGA AACTAGCCGC GGCGCCCAAA
ACCTGGGTGT TGCGCGATTT CCATTCGCCC AACCTGATCT GGCTGGAGCA GCGGCGCGAC
ACCGGAAAGG TCGGCGTCAT CGACTTTCAG GATACCGTGC TCGGTCCCGC AGCCTACGAT
CTGGTCTCGC TTTTGCAGGA CGCGCGGGTG GACGTGCCGG AATCGCTCGA ACTCGCCCTT
TTGACCCGCT ACATGAAGGC GCGGCTGGGA TCGGGCCAGC CGTTCGACCC CGCCGGCTTT
GCCGAGCTTT ACGCCATCAT GTCGGCGCAG CGCAACACGC GGCTGCTGGG CACGTTCGCG
CGGCTCAACC GTCGCGACGG CAAGCCGCAT TATCTGCGTC ATCAACCCCG GATCTGGACC
TATCTTACCC GCTCGCTGGC CCACCCCGCA TTGTCAGCGA TCAGGGCCTG GCATCAGGCT
CACGTTCCAC CTCCGTCGGA CTGA
|
|---|
| Protein sequence | MTGPSTFATA LANETATAHL MADLALLIGP GDVITLSGDL GAGKTAAARA MIRYLAGDDT
VEVPSPTFTL AQHYDLPCYP LLHADLYRIN GPGELEEIGL APLPDATVVL IEWPERAAGA
LPTDRIDIAI SHRPALGSAA RAAEITGYGN AAAQVARLAA LRRFLDDAGY LDATRQHMAG
DASTRSYARL IRSDGRFILM NAPRRPDGPA IHDGKSYSAA VHLAEDVKPF VAIARGLRDH
GFSAPAIHHA DLESGFLITE DFGSAGFVEG TPPAPIAERY QVATDMLAAL HCRTLPEILP
VAPHIPYTIP VFDTEAMLVE VGLMLDWYLT DRGVEPSDDL RAEFMAMWRV LLAKLAAAPK
TWVLRDFHSP NLIWLEQRRD TGKVGVIDFQ DTVLGPAAYD LVSLLQDARV DVPESLELAL
LTRYMKARLG SGQPFDPAGF AELYAIMSAQ RNTRLLGTFA RLNRRDGKPH YLRHQPRIWT
YLTRSLAHPA LSAIRAWHQA HVPPPSD
|
|---|
| |