| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0049 |
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| Symbol | ubiE |
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| ID | 4029759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 54202 |
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| End bp | 54963 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637968582 |
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| Product | ubiquinone/menaquinone biosynthesis methyltransferase |
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| Protein accession | YP_575410 |
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| Protein GI | 92115681 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | [TIGR01934] ubiquinone/menaquinone biosynthesis methyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.522687 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATCAGC CGGGCGACAC CACGCATTTC GGCTTCAGGG ACGTCCCCCT GGGGGACAAG
CAGACGCTGG TGAACGGCGT GTTTCACAAC GTGGCGCAGC GCTACGACCT GATGAACGAT
CTGATGTCCG CAGGGCTGCA CCGGGTCTGG AAAGACGCGA CCATCACGGC CCTCAACCCG
CCGCGCAACG ATACGCCGTT CGCGCTGCTC GACGTCGCCG GCGGCACCGG GGACATCGCC
TTCCGCGCGG CAAAAGCCGC AGGGCTTGGA TTTCGGGCCA CCGTCTGCGA CATCAATCCG
GACATGCTTG CGGTCGGCCA CGAGCGCGCG ATCAAGCAGC ATCTCGATCA TCAGGTGTCG
TTCGTCGAAG GCAACGCCGA GACGCTGGCG TTCGCAGACC GCAGTTTTGA CGCCTACACC
ATCGCCTTCG GCATCCGCAA CGTGCCGCGG ATCGACAGCG CGCTGCGCGA GGCGTTTCGC
GTGCTGAAAC CGGGCGGCCG GTTTCTCTGC CTCGAATTCT CGACGGTCGA TGTGCCCGGG
CTCGACAAAA TCTACGACCT GTTTTCCTTC AAGGTGATCC CGCCGCTCGG CCGCGCCGTT
ACCGGCGACG CCGACTCCTA TCAGTATCTG GTCGAGTCGA TCCGCAAGTT TCCGAAACCG
AATGCCTTCG CCGACATGAT CCGTGACGCC GGCTTCGCGC GCGTTACCTG GCAAGTCCTC
TCGGGCGGCA TCGTCGCACT GCACTCGGGC TGGCGTTTGT GA
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| Protein sequence | MDQPGDTTHF GFRDVPLGDK QTLVNGVFHN VAQRYDLMND LMSAGLHRVW KDATITALNP
PRNDTPFALL DVAGGTGDIA FRAAKAAGLG FRATVCDINP DMLAVGHERA IKQHLDHQVS
FVEGNAETLA FADRSFDAYT IAFGIRNVPR IDSALREAFR VLKPGGRFLC LEFSTVDVPG
LDKIYDLFSF KVIPPLGRAV TGDADSYQYL VESIRKFPKP NAFADMIRDA GFARVTWQVL
SGGIVALHSG WRL
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