| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0048 |
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| Symbol | |
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| ID | 4029758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 53229 |
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| End bp | 54110 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637968581 |
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| Product | formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_575409 |
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| Protein GI | 92115680 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.683783 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGAAC TCCCCGAAGT CGAAACCGTT CGTCGCGGCT TGCAGCCTGC CATGGAGGGC
GCGACCATCG TTCGCGCTGA GACCCGTCGC AAGGACCTGC GGTTTCCGTT CCAGACCGAT
TTTGTCGCCC GCCTGGAGGG CCAGACCGTG ACCGGGCTCG GGCGGCGGGC CAAATACCTG
TTGGCGGACC TCGCCTCCGG CGACGTGCTG TTGATGCATC TCGGCATGTC CGGCTCGTTC
CGCGTGATTG ATGCGGCCGG TGCCACGGCT CCGGGCGATT GTCACCATCC GCGCAACGAG
GACCGCGCCC ACGACCATGT GAGTTTTACG ATGTCGTCGG GCGCCAGCGT GATCTTCAAC
GATCCGCGCC GGTTCGGCTA CATGAAGGTC ATCGCCCGCA CGGTGCTCAA CGACGAGCCG
CTGCTGAAAG GGCTCGGCCC GGAGCCGCTC GGCAACGAAT TCGACGCGGC GATGCTGGCG
CGCGCGTGCC GCGACAAAAA GACCAGCCTC AAGGCCGCGC TGCTCGACCA GCGCGTGGTC
GCGGGGCTGG GCAACATCTA TGTGTGCGAG GCGCTGTTTC GCGCACACCT GTCGCCGCGT
CGTCTCGCCG CGACGCTGGC TTCGAAAACG GGGGGGCCGG CCGATCGTGC CGGACGGTTG
GTCGAGGCCA TTCACGACGT GCTCAATCAG GCGATCAAGG CCGGCGGATC GTCGCTGCGC
GATCATCGCC AGACCACGGG CGAACTGGGT TACTTCCAGC ATTCGTTTCG GGTCTACGAC
CGCGAGGGCG AAAAATGCCG GACGCCGACA TGCAGGGGCA CGGTAAAGCG TTTTACGCAG
AACGGACGTT CGACGTTCTG GTGTCCGGTT TGTCAGAAGT AG
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| Protein sequence | MPELPEVETV RRGLQPAMEG ATIVRAETRR KDLRFPFQTD FVARLEGQTV TGLGRRAKYL
LADLASGDVL LMHLGMSGSF RVIDAAGATA PGDCHHPRNE DRAHDHVSFT MSSGASVIFN
DPRRFGYMKV IARTVLNDEP LLKGLGPEPL GNEFDAAMLA RACRDKKTSL KAALLDQRVV
AGLGNIYVCE ALFRAHLSPR RLAATLASKT GGPADRAGRL VEAIHDVLNQ AIKAGGSSLR
DHRQTTGELG YFQHSFRVYD REGEKCRTPT CRGTVKRFTQ NGRSTFWCPV CQK
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