Gene Nham_0030 details

Gene Information

• Locus tag: Nham_0030
• ID: 4029797
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: +
• Start bp: 31572
• End bp: 32237
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637968564
• Product: hypothetical protein
• Protein accession: YP_575392
• Protein GI: 92115663
• COG category: [K] Transcription
• COG ID: [COG2740] Predicted nucleic-acid-binding protein implicated in transcription termination

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTCGCCA TCGCCGACCC GGCAGATCTT GATGACGGAC CGCGGACCAA CAGGCCCGCG 
ACGACGCGGA TGTGCGCGGT CACGCGCGAG GTGCGTCCGA TCGGCGAATT GATCCGGTTT 
GTGGTGTCGC CCTCGGGCGA GGTTATCGCC GACCTGAAAC GCAAACTGCC GGGCCGGGGC 
CTGTGGATTT CGGCCTCCCA CGCCACCGTT GCGGAAGCGG CCCGTCGTCA CCACTTTAGC 
AAGGGCTTCA AGCGGGACGT GCGCGTATCG GCGTCTCTCG CCGACGAGAC CGGGCAGTCG 
CTGGCCCGCA GCGCGATCGA CGCGCTGGCT GTGGTCGCCA AGGCCGGGCA GGTCGTCGCC 
GGTTTTGCCA AGGTCGAGGA CGCACTGCTT CGGCGTCAGG CGGTCGCCCT GCTCCACGCC 
GCGGACGGCG CCGCCGACGG AATCCGGAAA TTGGACGCTA TCGTTAAGAA AACAGCCGCG 
GAGTCCCGCG AAACGCGGGA AATCCCGGTA ATCAGCGCGC TGGCGTCGGC AGAATTGGAT 
TTGGCACTTT GCCGGTCAAA TGTGATACAT GCAGCCGTGC TCGCAGGCCC GGCGGGCAGA 
ACGTTCCTGT CGCGCAGCCA GACCCTGGTC CGATACCGGG ATGGCGGGCA GCGGCAAGGC 
AGTTGA 

 

Protein sequence

MLAIADPADL DDGPRTNRPA TTRMCAVTRE VRPIGELIRF VVSPSGEVIA DLKRKLPGRG 
LWISASHATV AEAARRHHFS KGFKRDVRVS ASLADETGQS LARSAIDALA VVAKAGQVVA 
GFAKVEDALL RRQAVALLHA ADGAADGIRK LDAIVKKTAA ESRETREIPV ISALASAELD 
LALCRSNVIH AAVLAGPAGR TFLSRSQTLV RYRDGGQRQG S