Gene Nham_0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0017 
Symbol 
ID4029843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp18143 
End bp19273 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content68% 
IMG OID637968551 
Producthypothetical protein 
Protein accessionYP_575379 
Protein GI92115650 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0357647 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGACG TTACGGGCAC GCGTTATTAT GATGGGGCGG TTTATTCCGC CGGATCGCCC 
CGTAAGGCCG TTCCACAAAA TATTCTCGGC GCTGCCGCGC TCGGTTGCAT CGCGCTTGCC
TGCGCCTGGA CGCTCTACGC CAACGTTTCC GGCGGAGACC CGGAACTGGT CACGGCATCG
CTGCCGCCGG CCACATCCAT CCGCTCGGTG GAACCGGCCG ATCGCATCGC GGCCGCGTAC
GAGGCGTTGC GCGAGATGCC CGCGCCGCAA GCCGTACAAG GGACGACCGA AGCCCGCACG
GCGGCTGCCG CCAGCATCGA CGATCCCGCC GCGCGGGCCC GCACGGCATT GCTCTACGGT
CCGCGCTTCC TCGGCCCGCC GCCGGGAACC TTCCGGCTGT CGGCGGAGCC GGCTCAGGCT
GCGCGAGAGG TTGCCTCGCT TCCCGCGCAG GCTGGACCGG AGACCCTGCC GCTTCCGCGC
GCGCCGCAGC TCGTCGCGGT GGTCGTGCCG ATGCCGGCGC CTCGTCCGGC CGAACTGCGT
CAGGTGCAGG TTGCTGCCGG TCCATCCCGC CGCGAGGTCG CGCAGGCCAG CGCCGCTGCC
GCGCTGGAGC CGGAGCCGAA AAAGCCATCC ATCTTCGAGA GGCTGTTCGG CAAACCCGCA
TCCGGTGGTC TGCAACTCGC GTTCGCTGCG CCCGACGGCG GGGTGACGAG CGAGGGTGAG
AGCCTGACGC TCGGTCGCAT CCCGCAATAC GACCAGTTCA CCGCCGTCTA CGATATTTCC
GCGCGCACGG TCTATCTACC GGACGGCACC AAACTCGAGG CGCATTCGGG GCTCGGCAAA
ATGATGGACG ATCCGCGCTA TGCCGACAGG AAAATGCGCG GCGTGACGCC GCCGCACACC
TACGAGCTGT CGCTGCGCGA GCGCCCTTTC CACGGCGTCG AAGCGATCCG GCTGAAACCG
GTCGGCGGCG AGGACAAGAT ATACGGGCGC ACCGGGCTGC TCGCGCATAC CTACATGCTC
GGGCCGAACG GTGATTCCAA CGGCTGCGTG TCGTTCAGGA ACTACAACGC TTTCCTGCGC
GCCTACAAGA GCGGCCGGGT CAAGCGGATG GTTGTCGTCG CAAAACTCTG A
 
Protein sequence
MTDVTGTRYY DGAVYSAGSP RKAVPQNILG AAALGCIALA CAWTLYANVS GGDPELVTAS 
LPPATSIRSV EPADRIAAAY EALREMPAPQ AVQGTTEART AAAASIDDPA ARARTALLYG
PRFLGPPPGT FRLSAEPAQA AREVASLPAQ AGPETLPLPR APQLVAVVVP MPAPRPAELR
QVQVAAGPSR REVAQASAAA ALEPEPKKPS IFERLFGKPA SGGLQLAFAA PDGGVTSEGE
SLTLGRIPQY DQFTAVYDIS ARTVYLPDGT KLEAHSGLGK MMDDPRYADR KMRGVTPPHT
YELSLRERPF HGVEAIRLKP VGGEDKIYGR TGLLAHTYML GPNGDSNGCV SFRNYNAFLR
AYKSGRVKRM VVVAKL