Gene Nham_0014 details

Gene Information

• Locus tag: Nham_0014
• ID: 4029840
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: +
• Start bp: 15896
• End bp: 16621
• Gene Length: 726 bp
• Protein Length: 241 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637968548
• Product: transposase, IS4
• Protein accession: YP_575376
• Protein GI: 92115647

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.0462942
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGGCAGC ACCAGGTCAA GCGGCTGTTA TCAAGCGAGC ATTTTTCGGT CGACGGCACG 
CTGATCGAGG CGTGGGCATC GATCAAGAGC TTCCGGCGCA AGGACGGCGG TGACCAGGAC 
AGTGATGGAC CGGGACGCAA CGCCGAGCGC AGTTTCCACA ACGAGAAGCG CTGCAACGAG 
ACGCATCAGA GCACGACCGA TCCCGAGGCA CGGCTCTATA AGAAGGGCGG CGGCCAGCCG 
GCGAAGCTTT GCTACATCGG CCATGCCCTG ATGGAGAACC GCAACGGACT GGCGGTGCTG 
GGTGGCGTGA GCCGGGCGAC CGGAACGGCG GAGCGGGATC AGGCGTTGGC GCTGATCGAC 
TGCCACCGCG GCCAAAGCGA GCGGCGGATC ACGCTGGGCG CCGACAAGGC CTATGACGTC 
ACCGCATTCG TCGAGGACTT AAGACGGCGT TCGGTCACGC CGCACATCGC CATCGACGGG 
CATTTGAGCA AGACCGGAAA GCCGCGCAAG ACCGCGATCG ACCAGAGGAC TCTCCGTCAT 
GCCGGATATG CCGTCAGCCA ACGCTGTCGC AAGCGCATCG AGGAGGTGTT CGGCTGGATC 
AAGGCCTCCG CCGGACTTGC CAAGATCAAG CTGCGAGGCC GCGACCGCGT CAACGCCACC 
TTCACCCTGG CGCTGGCGGC CTACAACCTG ATCCGCTTGC CCAAACTCCT GGCAGCCGCC 
GCGTGA 

 

Protein sequence

MGQHQVKRLL SSEHFSVDGT LIEAWASIKS FRRKDGGDQD SDGPGRNAER SFHNEKRCNE 
THQSTTDPEA RLYKKGGGQP AKLCYIGHAL MENRNGLAVL GGVSRATGTA ERDQALALID 
CHRGQSERRI TLGADKAYDV TAFVEDLRRR SVTPHIAIDG HLSKTGKPRK TAIDQRTLRH 
AGYAVSQRCR KRIEEVFGWI KASAGLAKIK LRGRDRVNAT FTLALAAYNL IRLPKLLAAA 
A