| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0004 |
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| Symbol | gyrB |
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| ID | 4029830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 4459 |
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| End bp | 6900 |
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| Gene Length | 2442 bp |
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| Protein Length | 813 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637968538 |
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| Product | DNA gyrase subunit B |
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| Protein accession | YP_575366 |
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| Protein GI | 92115637 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0771659 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGAAT CCGCCGGGCA GCAACTTGCC GATACAGAAC CTGCCGCGCC CGTCGAATAC
GGCGCGGAAT CGATCCGGGT TCTCAAGGGC CTCGACGCCG TGCGCAAGCG GCCCGGCATG
TATATCGGGG ACACCGATGA CGGATCCGGC CTGCATCACA TGGTGTATGA AGTCGTCGAC
AACGCCATCG ACGAAGCCCT GGCGGGACAC GCCACCCGCG TCGAGGTGAT CCTCAACGCC
GACAATTCGG TCACGGTGCG CGACGACGGC CGCGGCATTC CCGTCGACAT TCACAAGGGC
GAAGGCATCT CCGCGGCCGA GGTCATCATG ACCCAGCTCC ATGCCGGCGG TAAGTTCGAC
CAGAACTCCT ACAAGGTCTC CGGCGGATTG CACGGCGTCG GCGTCTCGGT GGTGAACGCG
CTGTCGAGCA AGCTGATCCT GCGCATCTGG CGCAAGGACA AGGAGCACCT GATCGAATTC
GCCCATGGCG ACGCCGTGGC GCCGTTGAAA GTCGTCGGCG AGGCCAACGG CAAGCGCGGC
ACCGAAGTCA CTTTTCTTGC CTCGAGGGAG ACCTTCACCA ACGTCGAATA CGATTTCGCC
ACGCTGGAGC ATCGCCTGCG CGAACTCGCG TTTCTGAACT CCGGCGTCAA CATCCTGCTC
TCGGACCTGC GTCGTGCCGT CGAGAAGCGC GAGCAGATGA TGTACGACGG CGGCGTCGTC
GAATTCGTCA AATACCTCGA CCGCAACAAG AAGGCGATGG TGCCGGAGCC GATCATGATC
CGCGCCGACA TGAACGGCCT CGGTGTCGAG GCGGCGCTGT GGTGGAACGA CAGCTATCAT
GAAAACGTGC TCTGCTTCAC CAACAACATT CCGCAGCGCG ACGGCGGCAC CCATCTCGCC
GGTTTCCGCG GCGCGCTGAC GCGGCAGGTC AACGGCTATG CCGACGCCAT GGCCAGGAAG
GAGAGGATCG CGCTGACCGG CGACGATTGC CGCGAGGGCC TGACCGCGGT GCTTTCGGTG
AAAGTACCGG ACCCGAAATT CTCGTCGCAG ACCAAGGACA AGCTGGTGTC CTCGGAAGTG
CGGCCGGTGG TCGAGAATGT CATCAACGAA GCCTTGGCTG CGTGGTTCGA GGAACATCCG
ACCGAGGCGA AGCTCATTGT CGGCAAGGTG GTCGAGGCGG CGGCGGCCCG CGAGGCCGCG
CGCAAGGCGC GCGAACTGAC GCGGCGCAAG GGCGCGCTCG ACGTCGCTTC GCTTCCCGGC
AAGCTCGCCG ACTGCCAGGA ACGCGACCCG GCGAAGTCGG AGTTGTTCAT CGTCGAGGGC
GACTCGGCCG GAGGCAGCGC CAAGCAGGGC CGCAACCGCG AATTCCAGGC CGTCTTGCCA
CTCCGTGGCA AGATCCTGAA CGTCGAGCGC GCGCGCTTCG ACAAGATGCT GTCGTCCGAG
CAGATCGGCA CGCTGATCAC CGCGCTCGGC ACCGGCATCG GTCGCGAGGA TTTCGACCTG
TCGAAGCTGC GCTATCACAA GATCATCGTG ATGACCGACG CCGACGTCGA CGGCGCGCAT
ATCCGCACGC TGCTGCTGAC GTTCTTCTTC CGGCAGATGC CGACGCTGAT CGAGGCCGGC
CATCTCTATA TCGCCCAGCC GCCGCTCTAC AAGGTGACCC GCGGCAAGTC CGAGCAGTAT
CTGAAGGACG AGCGCGCGCT GGAAGACTAT CTGATCGAGA CCGGGCTCGA CGACTGCGTG
TTCAAGCTCG CCACCGGCGA AGACCGCAGC GGCCGCGACC TGCAGGCACT GGTGGAAGAC
GCCCGCGTCA TCCGCAATGT GCTGCACAAC ATGCACGGCC GGTACAACCG CAGCGTCATC
GAACAGGCGG CGATTGCCGG TGTGCTGAAC CCGCGGGTGA CGGCGGACGT CGCGACCGCC
AACGCCGCGG CCGATTACAT CGCCAGGCGG ATGGATGCGC TGGCCGACGA AGTCGAGCGT
GGCTGGATCG GACGTTTCAC AGAGGGCGAG GGTTTTTCTT TCGAGCGCAC CGTGCGCGGC
GTCAAGGACA TTGCCATGAT CGACGACGCG CTGCTCGGCT CGGCCGATGC GCGCAAGCTC
GACGAATACG CTGCGAAGCT ACAGGAAGCC TATCCGCGGC CGGGCCTCTT GCGCCGCAAG
GATACCGAAA CCCCGATCCA CGGCCCGGTC GGCCTGTTCG AGGCGGTAAC CGACGCCGGC
CGCAAGGGCG TGGCGCTGCA ACGCTACAAA GGTCTCGGCG AGATGAACCC GGACCAGCTC
TGGGAAACCA CGCTCGATGC CAGCGAGCGT TCGCTGCTGC AGGTGAAGAT CAAGGAGGTC
GACGAGGCCG ACGACATCTT CACCAAGCTG ATGGGCGACG TGGTCGAGCC GCGCCGCGAG
TTCATCCAGG AAAACTCGCT CAGCGCCAAC GTGGACGTGT GA
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| Protein sequence | MNESAGQQLA DTEPAAPVEY GAESIRVLKG LDAVRKRPGM YIGDTDDGSG LHHMVYEVVD
NAIDEALAGH ATRVEVILNA DNSVTVRDDG RGIPVDIHKG EGISAAEVIM TQLHAGGKFD
QNSYKVSGGL HGVGVSVVNA LSSKLILRIW RKDKEHLIEF AHGDAVAPLK VVGEANGKRG
TEVTFLASRE TFTNVEYDFA TLEHRLRELA FLNSGVNILL SDLRRAVEKR EQMMYDGGVV
EFVKYLDRNK KAMVPEPIMI RADMNGLGVE AALWWNDSYH ENVLCFTNNI PQRDGGTHLA
GFRGALTRQV NGYADAMARK ERIALTGDDC REGLTAVLSV KVPDPKFSSQ TKDKLVSSEV
RPVVENVINE ALAAWFEEHP TEAKLIVGKV VEAAAAREAA RKARELTRRK GALDVASLPG
KLADCQERDP AKSELFIVEG DSAGGSAKQG RNREFQAVLP LRGKILNVER ARFDKMLSSE
QIGTLITALG TGIGREDFDL SKLRYHKIIV MTDADVDGAH IRTLLLTFFF RQMPTLIEAG
HLYIAQPPLY KVTRGKSEQY LKDERALEDY LIETGLDDCV FKLATGEDRS GRDLQALVED
ARVIRNVLHN MHGRYNRSVI EQAAIAGVLN PRVTADVATA NAAADYIARR MDALADEVER
GWIGRFTEGE GFSFERTVRG VKDIAMIDDA LLGSADARKL DEYAAKLQEA YPRPGLLRRK
DTETPIHGPV GLFEAVTDAG RKGVALQRYK GLGEMNPDQL WETTLDASER SLLQVKIKEV
DEADDIFTKL MGDVVEPRRE FIQENSLSAN VDV
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