| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0002 |
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| Symbol | |
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| ID | 4029828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 1738 |
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| End bp | 2856 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637968536 |
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| Product | DNA polymerase III subunit beta |
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| Protein accession | YP_575364 |
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| Protein GI | 92115635 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0730917 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGTCA CCGTCGAACG CGCACAACTG CTGAAATCGC TTGGCCACGT ACATCGCGTG
GTCGAACGGC GGAACACGAT CCCGATTTTG GGAAACGTGC TGGTTCGCGC CGAAAACGCC
AGGTTGTCGC TGAAGGCCAC CGATCTCGAT CTGGAGGTGA CGGAAACGCT GGCGGCGGAA
ACCGCAACCG GCGGCGCGAC CACGGTTCCG GCGCACATAT TCTACGACAT CGTCCGCAAA
CTGCCCGACG GCGCGCAAAT CGTACTGGAG GGCGACGGCG ACCGCTCGGT GCTGGCGATC
CGCGCCGGAC GCTCGCGCTT CACCTTGCAG ACGCTGCCTG AAAACGATTT CCCCGATCTC
GCGGCTGGCG AGATGACGCA TTCCTTCAAG CTCGCAGCCG CCGACATCAA GCGACTGATC
GATCGTACTC AATTTGCGAT CTCGACCGAG GAGACCCGCT ATTATCTCAA CGGTATCTAC
CTGCACAGCG CCGGCAGCGC CAAAAACGCA ACGCTGCGCG GCGTCGCCAC CGACGGTCAC
CGCCTCGCGC AGGTCGATCT CGCGCTACCC AACGGCGCTG AGGGAATGCC TGGCGTCATC
ATCCCGCGCA AGACGGTCGG CGAGGTGCAG CGGCTGATCG AGGACAACGA AGCCGAGGTT
GGAATCGAAC TGTCGCAGGG CAAGATCCGG TTCACCATCG GCAACGTCGT GCTGACCTCG
AAGTTGATCG ACGGCACCTT CCCGGACTAC GGCCGGGTGA TCCCGCAGAA CAACGACAAG
GAACTGATCG TCGACAAAAA GGATTTCGAG GCGGCGGTCG ATCGCGTCTC GACGATTTCC
AGCGAGCGCG GCCGCGCCGT GAAGCTGGCG CTATCGGCGG GCAAGCTCGT TCTGTCCGTG
ACCAACCCCG ATTCCGGCAG CGCCACCGAG GAGCTCGAGG TCGAATACGC TTCTGAGCCG
CTCGATATCG GGTTCAATTC GCGCTACCTG CTGGACATCG CCGCGCAGAT CGAGGGCGAG
GGCGCGGTGC TGAAGCTCGC CGACCCCGGT TCGCCGACGC TGGTGCACGA CAAGGATTCC
AAAGGCGCGC TCTACGTGCT GATGCCGATG CGGGTGTGA
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| Protein sequence | MKVTVERAQL LKSLGHVHRV VERRNTIPIL GNVLVRAENA RLSLKATDLD LEVTETLAAE
TATGGATTVP AHIFYDIVRK LPDGAQIVLE GDGDRSVLAI RAGRSRFTLQ TLPENDFPDL
AAGEMTHSFK LAAADIKRLI DRTQFAISTE ETRYYLNGIY LHSAGSAKNA TLRGVATDGH
RLAQVDLALP NGAEGMPGVI IPRKTVGEVQ RLIEDNEAEV GIELSQGKIR FTIGNVVLTS
KLIDGTFPDY GRVIPQNNDK ELIVDKKDFE AAVDRVSTIS SERGRAVKLA LSAGKLVLSV
TNPDSGSATE ELEVEYASEP LDIGFNSRYL LDIAAQIEGE GAVLKLADPG SPTLVHDKDS
KGALYVLMPM RV
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