Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_3316 |
Symbol | |
ID | 4028861 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | - |
Start bp | 3693847 |
End bp | 3695574 |
Gene Length | 1728 bp |
Protein Length | 575 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637968531 |
Product | putative inner membrane protein translocase component YidC |
Protein accession | YP_575359 |
Protein GI | 92115431 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0706] Preprotein translocase subunit YidC |
TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain [TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.783784 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGTCGTC AGAATGTTTC ACCGGGCAGA ATCCTTATGG ACGTAAAACG ACTCTTACTC GTCATCCCGC TCGCGGTGCT CGCCTATCTG CTGGTCATTC AGTGGAACGC TGATTACGGG CAGAACAATG TCGAACACAG CGCTCCCACC AGCGTGGCGC AAGGTACCAC CGATAGCGAT GACGCCAGTG AAGGCTTGTC GGCGCCTTCG GCTTCCAACG CCGGCAATAA CGCATCGCCA GACAGTGCCG GCATGCCCGG CGAGAAGTCC CAGACCGACG CCAACGGCCT CATCCAGGTG CGTACCGACG TACTGGACCT GCGCATCGAT CCGCGCGGCG GCGATGTGGT GTACGCCGCG TTGCCCAAGC ACAAGGCGTC TCTGGACAGT GATCAGCCGT TCGTGCTTCT CAGCGACAAC AACGTACGCA GCTATGTCGC CAAGTCGGGC CTGCAGCTCG AGGGGCACGA AGGGCGCATT ACCTATACCC CCGAGCAGAC GGAGTACACC CTCGGCGAGG ATCAGGACAG CCTGACCGTC GACCTCAAGG CTGAGGTCAA CGGCGTGAAC GTCATCAAGC GTTTCGTCTT CGATCGCAAT GCATACGCGG TCCATGTCGA ATATCGGCTC GACAACGAGA GCCAGACGCC GGTGTCGGCA CGCTTCATCG GTCAGCTGGC GCGGGATGAC AGCGATGATC CCAGCCAGGG CGTCTCCATG GGCATGAAGT CCTTCCTGGG GGCGACCTTC TCCACGCAAG AAAGCAACTA CGAGAAGATC AGCTTCGAGG ACATTCGCGA CGGCGAATTC AACAACGTCG AATCCGAGGG TGGTTGGGTC GCCATGATCC AGCACTACTT CACCTCGGCG TGGGTGCCGG AGCAGAACCA GGAAAACCTT TACTACGCCA ACATCGATTC ACGCGATCGC AATGTGGCCG CGTTTGCCGG TCCTTCGCAG CAGATCGCCC CCGGCGAAAC GACCCGCATG GCCGCGACGC TCTACATGGG GCCGAAGATC CAGGATCGTC TGGAGGCCAT CGCCCCTCAT CTGGAGCTGA CCGTCGACTT CGGCTGGCTG TGGTTCATCG CCAATCCGCT GTTCTGGCTG CTGGCGAAAA TCCATAGCCT GATCGGCAAC TGGGGCTGGT CGATCGTGCT GCTCACGGTC ATCGTCAAGA TCGTGCTGTT CCCGCTGTCC GCCAAGGCGT ACAAGTCGAT GGCCAAGATG CGCAAGATGG GCCCGGAGAT GAAGCGCATC AAGGAACAGT ACGGCGACGA CCGGCAGAAG ATGTCCCAAG AGATGATGAA GTTCTACCAG AAGGAGAAGA TCAATCCTCT GGGGGGCTGT CTGCCCATCG TCGTGCAGAT GCCGGTATTC ATCGCGCTGT ACTGGATGTT GCTGGAATCC GTGGAGTTGC GCCACGCTCC CTTCATTCTG TGGATCAACG ATCTCTCGGC ACAGGATCCC TACTTCATCC TGCCGATCAT CATGGGTGCC TCGATGTTCG TGCAGCAGTT GTTGAATCCC ACGCCGCCGG ACCCGATGCA GGCGAAGATC ATGAAGATGC TGCCCGTGGT CTTCACGTTC TTCTTCCTGT GGTTCCCGGC AGGCCTGGTC ATCTACTGGA TCTGCAACAA CGTCATCTCG ATCCTTCAGC AGTGGATCAT CACGCGCAAG ATCGAAGCCG ATGGCGAGTC GGGAAAAACG AGTAAAGCCA AGAGCTGA
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Protein sequence | MCRQNVSPGR ILMDVKRLLL VIPLAVLAYL LVIQWNADYG QNNVEHSAPT SVAQGTTDSD DASEGLSAPS ASNAGNNASP DSAGMPGEKS QTDANGLIQV RTDVLDLRID PRGGDVVYAA LPKHKASLDS DQPFVLLSDN NVRSYVAKSG LQLEGHEGRI TYTPEQTEYT LGEDQDSLTV DLKAEVNGVN VIKRFVFDRN AYAVHVEYRL DNESQTPVSA RFIGQLARDD SDDPSQGVSM GMKSFLGATF STQESNYEKI SFEDIRDGEF NNVESEGGWV AMIQHYFTSA WVPEQNQENL YYANIDSRDR NVAAFAGPSQ QIAPGETTRM AATLYMGPKI QDRLEAIAPH LELTVDFGWL WFIANPLFWL LAKIHSLIGN WGWSIVLLTV IVKIVLFPLS AKAYKSMAKM RKMGPEMKRI KEQYGDDRQK MSQEMMKFYQ KEKINPLGGC LPIVVQMPVF IALYWMLLES VELRHAPFIL WINDLSAQDP YFILPIIMGA SMFVQQLLNP TPPDPMQAKI MKMLPVVFTF FFLWFPAGLV IYWICNNVIS ILQQWIITRK IEADGESGKT SKAKS
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