Gene Csal_3316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_3316 
Symbol 
ID4028861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp3693847 
End bp3695574 
Gene Length1728 bp 
Protein Length575 aa 
Translation table11 
GC content59% 
IMG OID637968531 
Productputative inner membrane protein translocase component YidC 
Protein accessionYP_575359 
Protein GI92115431 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0706] Preprotein translocase subunit YidC 
TIGRFAM ID[TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.783784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTCGTC AGAATGTTTC ACCGGGCAGA ATCCTTATGG ACGTAAAACG ACTCTTACTC 
GTCATCCCGC TCGCGGTGCT CGCCTATCTG CTGGTCATTC AGTGGAACGC TGATTACGGG
CAGAACAATG TCGAACACAG CGCTCCCACC AGCGTGGCGC AAGGTACCAC CGATAGCGAT
GACGCCAGTG AAGGCTTGTC GGCGCCTTCG GCTTCCAACG CCGGCAATAA CGCATCGCCA
GACAGTGCCG GCATGCCCGG CGAGAAGTCC CAGACCGACG CCAACGGCCT CATCCAGGTG
CGTACCGACG TACTGGACCT GCGCATCGAT CCGCGCGGCG GCGATGTGGT GTACGCCGCG
TTGCCCAAGC ACAAGGCGTC TCTGGACAGT GATCAGCCGT TCGTGCTTCT CAGCGACAAC
AACGTACGCA GCTATGTCGC CAAGTCGGGC CTGCAGCTCG AGGGGCACGA AGGGCGCATT
ACCTATACCC CCGAGCAGAC GGAGTACACC CTCGGCGAGG ATCAGGACAG CCTGACCGTC
GACCTCAAGG CTGAGGTCAA CGGCGTGAAC GTCATCAAGC GTTTCGTCTT CGATCGCAAT
GCATACGCGG TCCATGTCGA ATATCGGCTC GACAACGAGA GCCAGACGCC GGTGTCGGCA
CGCTTCATCG GTCAGCTGGC GCGGGATGAC AGCGATGATC CCAGCCAGGG CGTCTCCATG
GGCATGAAGT CCTTCCTGGG GGCGACCTTC TCCACGCAAG AAAGCAACTA CGAGAAGATC
AGCTTCGAGG ACATTCGCGA CGGCGAATTC AACAACGTCG AATCCGAGGG TGGTTGGGTC
GCCATGATCC AGCACTACTT CACCTCGGCG TGGGTGCCGG AGCAGAACCA GGAAAACCTT
TACTACGCCA ACATCGATTC ACGCGATCGC AATGTGGCCG CGTTTGCCGG TCCTTCGCAG
CAGATCGCCC CCGGCGAAAC GACCCGCATG GCCGCGACGC TCTACATGGG GCCGAAGATC
CAGGATCGTC TGGAGGCCAT CGCCCCTCAT CTGGAGCTGA CCGTCGACTT CGGCTGGCTG
TGGTTCATCG CCAATCCGCT GTTCTGGCTG CTGGCGAAAA TCCATAGCCT GATCGGCAAC
TGGGGCTGGT CGATCGTGCT GCTCACGGTC ATCGTCAAGA TCGTGCTGTT CCCGCTGTCC
GCCAAGGCGT ACAAGTCGAT GGCCAAGATG CGCAAGATGG GCCCGGAGAT GAAGCGCATC
AAGGAACAGT ACGGCGACGA CCGGCAGAAG ATGTCCCAAG AGATGATGAA GTTCTACCAG
AAGGAGAAGA TCAATCCTCT GGGGGGCTGT CTGCCCATCG TCGTGCAGAT GCCGGTATTC
ATCGCGCTGT ACTGGATGTT GCTGGAATCC GTGGAGTTGC GCCACGCTCC CTTCATTCTG
TGGATCAACG ATCTCTCGGC ACAGGATCCC TACTTCATCC TGCCGATCAT CATGGGTGCC
TCGATGTTCG TGCAGCAGTT GTTGAATCCC ACGCCGCCGG ACCCGATGCA GGCGAAGATC
ATGAAGATGC TGCCCGTGGT CTTCACGTTC TTCTTCCTGT GGTTCCCGGC AGGCCTGGTC
ATCTACTGGA TCTGCAACAA CGTCATCTCG ATCCTTCAGC AGTGGATCAT CACGCGCAAG
ATCGAAGCCG ATGGCGAGTC GGGAAAAACG AGTAAAGCCA AGAGCTGA
 
Protein sequence
MCRQNVSPGR ILMDVKRLLL VIPLAVLAYL LVIQWNADYG QNNVEHSAPT SVAQGTTDSD 
DASEGLSAPS ASNAGNNASP DSAGMPGEKS QTDANGLIQV RTDVLDLRID PRGGDVVYAA
LPKHKASLDS DQPFVLLSDN NVRSYVAKSG LQLEGHEGRI TYTPEQTEYT LGEDQDSLTV
DLKAEVNGVN VIKRFVFDRN AYAVHVEYRL DNESQTPVSA RFIGQLARDD SDDPSQGVSM
GMKSFLGATF STQESNYEKI SFEDIRDGEF NNVESEGGWV AMIQHYFTSA WVPEQNQENL
YYANIDSRDR NVAAFAGPSQ QIAPGETTRM AATLYMGPKI QDRLEAIAPH LELTVDFGWL
WFIANPLFWL LAKIHSLIGN WGWSIVLLTV IVKIVLFPLS AKAYKSMAKM RKMGPEMKRI
KEQYGDDRQK MSQEMMKFYQ KEKINPLGGC LPIVVQMPVF IALYWMLLES VELRHAPFIL
WINDLSAQDP YFILPIIMGA SMFVQQLLNP TPPDPMQAKI MKMLPVVFTF FFLWFPAGLV
IYWICNNVIS ILQQWIITRK IEADGESGKT SKAKS