| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_3307 |
|---|
| Symbol | |
|---|
| ID | 4028852 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | + |
|---|
| Start bp | 3684398 |
|---|
| End bp | 3685003 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637968522 |
|---|
| Product | Ham1-like protein |
|---|
| Protein accession | YP_575350 |
|---|
| Protein GI | 92115422 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
|---|
| TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGATC AAGACACGCT GGTGTTGGCC AGCGGCAACA CCGGCAAGCT GCGTGAATTC
CAGAGCCTGC TGGCCCCGCT AGGCCTCGAG GTGCGTCCGC AGCGTGACTT CGCTGTCACC
GAGGTCGAGG AAACCGGCCT GACCTTCGTC GAGAATGCCC TGCTCAAGGC GCGCGAAGCG
TCTCGAGTGA GTGGTTTGCC CGCCTTGGCC GACGATTCGG GACTCGAGGT TGATGCCTTG
CAGGGCGCGC CGGGGATTCG ATCGGCCCGC TTCGCGGGTG AGCCCTCCGA TGATGCCGCC
AACAATCGCA AGCTGCTGGA GGCGCTCAAG GACGTTCCGG AAGGCCAGCG CGGCGCCCGC
TTCTGGTGCG TGCTGGTGTA TCTGCGGCAT GCCGAGGACC CGGTCCCGCG CATCGTGCAA
TGTGCCTGGG AAGGCGAAGT ATTGGCATAT CCGCGCGGCG AGGGCGGGTT CGGTTACGAC
TCGCTGTTCT GGGTGCCCGA GCGCGCCATG ACCGCCGCAG AGTTGTCCGC CGAGGACAAG
AACCGACTCA GCCATCGCGG CAGGGCCATG CAGGCCCTGC TGGCGCAGCT CTCCGCGCCC
TCATGA
|
|---|
| Protein sequence | MADQDTLVLA SGNTGKLREF QSLLAPLGLE VRPQRDFAVT EVEETGLTFV ENALLKAREA
SRVSGLPALA DDSGLEVDAL QGAPGIRSAR FAGEPSDDAA NNRKLLEALK DVPEGQRGAR
FWCVLVYLRH AEDPVPRIVQ CAWEGEVLAY PRGEGGFGYD SLFWVPERAM TAAELSAEDK
NRLSHRGRAM QALLAQLSAP S
|
|---|
| |