Gene Csal_3303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_3303 
Symbol 
ID4028848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand+ 
Start bp3679399 
End bp3680061 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content69% 
IMG OID637968518 
Productthiamine-phosphate pyrophosphorylase 
Protein accessionYP_575346 
Protein GI92115418 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0352] Thiamine monophosphate synthase 
TIGRFAM ID[TIGR00693] thiamine-phosphate pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.535978 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCGGA CGCCGGATTG GACACGCGGC ATTTACGCCA TCACCGATGC GACGCTGCTG 
CCCGATGACG CTCATCTGTT TGCGGCATGC GAGCGAGCCC TCGAGGCGGG ACTGGCGCTT 
TTGCAGTATC GCGACAAGTC GGCGGACGCG GGCAAGCGCT GGCGTCAGGC CTCGGGGCTG 
GCCGCGCGTT GCCATGCGGC CGGCGTGCCG TTGATCGTCA ATGACGATAT CGCCCTGGCG 
GCGCGTCTGC GGTCACGCGT CGGGTCGCAT GTCGGTTTGC ATCTCGGCCA GCGGGATGGC 
TCGCTGCGTG ATGCACGTCA AGCCCTGGGC GACGAGGCGA TCATCGGCGC CACCTGTCAT 
GCGCGCCTGG ATCTGGCCGA GCGCGCGGCG GCCGAAGGCG CCAGTTACCT GGCTTTCGGT 
CGCTTCTTCG CCTCGCGCAC CAAGCCGGAG GCACCGCCGG CCTCCCTCGA CCTGCTCGGC 
GAGGCGGCAC GTTTCGGCCT GCCGCGTGTG GCGATCGGGG GGCTCGACGT CCACACTATG 
CGTCTAGCCC GTGAGGCCGG GGCGGACCTG CTGGCCACCG TGCATGCCGT CTTCGGTGCC 
GGTGATCCCG CCGCTGCCGT CAGGGCATTG CAGGCGAGTC TCGGCGACAC GGCACAGCAC 
TGA
 
Protein sequence
MNRTPDWTRG IYAITDATLL PDDAHLFAAC ERALEAGLAL LQYRDKSADA GKRWRQASGL 
AARCHAAGVP LIVNDDIALA ARLRSRVGSH VGLHLGQRDG SLRDARQALG DEAIIGATCH 
ARLDLAERAA AEGASYLAFG RFFASRTKPE APPASLDLLG EAARFGLPRV AIGGLDVHTM 
RLAREAGADL LATVHAVFGA GDPAAAVRAL QASLGDTAQH