Gene Csal_3297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_3297 
Symbol 
ID4028842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp3673994 
End bp3674665 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content62% 
IMG OID637968512 
Productamino acid ABC transporter permease 
Protein accessionYP_575340 
Protein GI92115412 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACGTCA ACTTCCAGTT CGACTGGCAG GCGGCCATCG CCTCCATTCC ACACCTGCTG 
ACCGGGATCC CCTGGACGCT GCTGATCTCG TTCGGCGGCC TGGCCATCGG TTTCGTCATC
GGCATCATCT TCGGCTTGCT GCGCATCAAC CCTCTGCGCG TGCTGCGCTG GCCCGCCATC
GCCTATATCG AAGTGTTCCG TGGCACACCG GTACTCGTGC AGGTGCTGTT CATCTTCTAT
GGCCTGCCGC AACTGCTGGG CGGACCGATC AATGCGGTAG TGGCGGGCAT CGCCGCCATC
GCCCTCAACG CCGGCGCCTA CATCTCGGAA ATCGTGCGTG GCGGGGTGCA GTCGATCGAA
AAGGGCCAGC GCGAAGCAGG ACTATCGCTG GGCCTGTCGC GCATCGACAC GTTCCGCTAC
ATCATCTGGC CACAAGCCTT GCGCCGCATG ATCCCCGCAT TGGGCAACCA GGGCATCGTC
AGCATCAAGG ACACGTCGCT GTTCTCGGTC ATCGGCGTCG GTGAGCTGGT GCGCCAGGGA
CAGGTCTACA TCGCCACCAC GTTCACCGCC CTGGAAGTCT ATTTCATGGT CGCCATGCTG
TATCTGGTGA TCACCCTGAG TCTCTCTACC GCCTTGCGTC TGCTCGAACG CAAGGGTCTG
GTCGGACAAT GA
 
Protein sequence
MDVNFQFDWQ AAIASIPHLL TGIPWTLLIS FGGLAIGFVI GIIFGLLRIN PLRVLRWPAI 
AYIEVFRGTP VLVQVLFIFY GLPQLLGGPI NAVVAGIAAI ALNAGAYISE IVRGGVQSIE
KGQREAGLSL GLSRIDTFRY IIWPQALRRM IPALGNQGIV SIKDTSLFSV IGVGELVRQG
QVYIATTFTA LEVYFMVAML YLVITLSLST ALRLLERKGL VGQ