Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_3297 |
Symbol | |
ID | 4028842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | - |
Start bp | 3673994 |
End bp | 3674665 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637968512 |
Product | amino acid ABC transporter permease |
Protein accession | YP_575340 |
Protein GI | 92115412 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGACGTCA ACTTCCAGTT CGACTGGCAG GCGGCCATCG CCTCCATTCC ACACCTGCTG ACCGGGATCC CCTGGACGCT GCTGATCTCG TTCGGCGGCC TGGCCATCGG TTTCGTCATC GGCATCATCT TCGGCTTGCT GCGCATCAAC CCTCTGCGCG TGCTGCGCTG GCCCGCCATC GCCTATATCG AAGTGTTCCG TGGCACACCG GTACTCGTGC AGGTGCTGTT CATCTTCTAT GGCCTGCCGC AACTGCTGGG CGGACCGATC AATGCGGTAG TGGCGGGCAT CGCCGCCATC GCCCTCAACG CCGGCGCCTA CATCTCGGAA ATCGTGCGTG GCGGGGTGCA GTCGATCGAA AAGGGCCAGC GCGAAGCAGG ACTATCGCTG GGCCTGTCGC GCATCGACAC GTTCCGCTAC ATCATCTGGC CACAAGCCTT GCGCCGCATG ATCCCCGCAT TGGGCAACCA GGGCATCGTC AGCATCAAGG ACACGTCGCT GTTCTCGGTC ATCGGCGTCG GTGAGCTGGT GCGCCAGGGA CAGGTCTACA TCGCCACCAC GTTCACCGCC CTGGAAGTCT ATTTCATGGT CGCCATGCTG TATCTGGTGA TCACCCTGAG TCTCTCTACC GCCTTGCGTC TGCTCGAACG CAAGGGTCTG GTCGGACAAT GA
|
Protein sequence | MDVNFQFDWQ AAIASIPHLL TGIPWTLLIS FGGLAIGFVI GIIFGLLRIN PLRVLRWPAI AYIEVFRGTP VLVQVLFIFY GLPQLLGGPI NAVVAGIAAI ALNAGAYISE IVRGGVQSIE KGQREAGLSL GLSRIDTFRY IIWPQALRRM IPALGNQGIV SIKDTSLFSV IGVGELVRQG QVYIATTFTA LEVYFMVAML YLVITLSLST ALRLLERKGL VGQ
|
| |