| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_3278 |
|---|
| Symbol | |
|---|
| ID | 4029027 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | + |
|---|
| Start bp | 3654543 |
|---|
| End bp | 3655463 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637968493 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_575321 |
|---|
| Protein GI | 92115393 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACGATC AACCCCAGGC GACGGCGCCA CTGGCCGTCG TGACCGGCGC CACCGCCGGG
CTAGGACTCG AGACCGCCAA GGGGCTCGCC GCCCACGGCT ATCGCGTGAT CGTGGCTGCG
CGCAACGCGG ACAAGGGCGC CTTGGCGTGC CATGCCATCC GCACCCATGT CCCGCGCGCC
ACGGTCCGTC ACGAAGCGCT CGACCTCGAC AGCCTCGCCT CGGTACGCGA CTTCGCCGCA
CGCCTGAACC AGGACGAATC CTCGCTGGCC CGTTTGATCA ACAATGCCGG GATCATGGCC
CTGCCACGCC TGGAGCGCAC CCGGGATGGC TTCGAGCGAC AATGGGGCGT CAACTTCCTG
GGCCACTTCC TGCTCACCAG CGAACTGCTG CCGCTGCTCG CCGCCGCGGC ATCGCCACGC
GTGGTGCAGC TATCCAGCCT CGCCCACCGG GGCGGACGCA TCGCCTTCGA CGACCCGAAC
GGCGAGGCGA ACTACGATCC CTGGCAAGCC TATCGGCAAT CCAAGCTCGC CATGCTGTTG
TTCGCCCAGG CGCTGCAGAA ACAAAGCGAC GCCCGACAGT GGGGGCTCGT GAGCCTTGCC
GCCCATCCCG GGCTGTCGCG TACCGCGCTG TTCGACGACG GCGTGAGAAG CCGTCCGATC
GTCGGCAGCG TCTTCAAGCT GGCCCTGCCG CTGATCAGTC AATCCGCCGC CGAGGGCGCC
CGCCCCATCC TGCACGCCGC GCTCAGCGAC ACGGTCGGCC CCGGCGATTA CATCGGGCCG
GACGGTCTGG GCGAAACCCG TGGCGCCCCC AGGGCAGCGC ATCGCGCCCG CCACGCACGC
GACCCGGCGG TCGAGGCCCG CCTGTGGGAG CTTGCCTGCG ACCTCACCGG TGCACGCTGG
GATACCACGG CCCCCGCGTA A
|
|---|
| Protein sequence | MHDQPQATAP LAVVTGATAG LGLETAKGLA AHGYRVIVAA RNADKGALAC HAIRTHVPRA
TVRHEALDLD SLASVRDFAA RLNQDESSLA RLINNAGIMA LPRLERTRDG FERQWGVNFL
GHFLLTSELL PLLAAAASPR VVQLSSLAHR GGRIAFDDPN GEANYDPWQA YRQSKLAMLL
FAQALQKQSD ARQWGLVSLA AHPGLSRTAL FDDGVRSRPI VGSVFKLALP LISQSAAEGA
RPILHAALSD TVGPGDYIGP DGLGETRGAP RAAHRARHAR DPAVEARLWE LACDLTGARW
DTTAPA
|
|---|
| |