Gene Csal_3263 details

Gene Information

• Locus tag: Csal_3263
• ID: 4029012
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chromohalobacter salexigens DSM 3043
• Kingdom: Bacteria
• Replicon accession: NC_007963
• Strand: +
• Start bp: 3636937
• End bp: 3638946
• Gene Length: 2010 bp
• Protein Length: 669 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637968478
• Product: diguanylate phosphodiesterase with GAF sensor
• Protein accession: YP_575306
• Protein GI: 92115378
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2200] FOG: EAL domain; [COG2203] FOG: GAF domain

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCCACT CGGCCTTTCG GCGCAACCGG GCGAATCGAG CGTCGGCGCG ACGTCGCCTT 
GTGCTAACGT TCCTAGCACC GGGATGCCTG CATGGCAGTG CTCAGGCGCT CCCACCCGCC 
TGCTTGCATG ACGCCGGGCC CGGCATCGCG ACGAGAGAAC ACTGCATGGT CAATGTCCCG 
GGGGTCGCTG CCCCCGATCA TCCCGATGAA ACGCGTCGCC TCGACGAGCT GCACCGCCTG 
GGGTTGATGG ATACCCCGCC CGAGAAGCGT TTCGACGACA TCACCCGGCT GGCCGCCCGA 
GTCTTCGGCG TGCCCATTGT GCTGATCACA CTGGTTGACC GCCACCGTCA GTGGTTCAAG 
TCGCGTTTCG GCATTGATGC CTGTGAAACG TCCCGCGACA ACGCCTTTTG CGCGCACGCC 
TTGCTGGAAC GCAAGCTGCT GGTGATCGAG GATACCACCC GGGATGCGCG TTTCCGTGAC 
CATCCGCTGG TCACCGAGAC GCCTTACATT CGCTTTTATG CCGGCGCCGT CATTCGCACG 
GCCGCGGGGC TGCCACTGGG CACGCTGTGC CTGATCGATC GCCATCCACG CCATTTCGAT 
GCCTCCCAGC GCGAGATATT GCTCGATCTC GCCCGACTGG TGGAGAACGA AATCGGCGAC 
GATGCCATCA TGCGGCTGGA ACGCGCACGC GCGGAGATCG GCACGCAATT CGATCCGCAA 
ACTCGCCTGG CCACGCAGCA GCGCTTTCAA CAACTCATCG AGGCGCGTCT GAACGCGCTC 
TCCGACGACG ACACCCTGTG CGGCGTGGCG GCCGTCGATC TCTACGGCAT GCGCGCGATA 
CGCACGCGCT TCTCGCTCCA GGTCAGCAAC AATGTCCTGA TGCGATGCAT CGCCCGGGTC 
GAGAAGGCTC TGGACGGATT CGTCTTCGAC CTGGCGCGTA TCGATGACCA GCGCCTGGGC 
GTCCTGCTCT ATCGCGGCGA CGCCACACGC ATGGCTGCCA CCATGGAGGC ACTGGCCACC 
ACGCTGCGCG CGCCCTACAT CGCCGCCGGC AAGACGGTCA CCGCGGCCGC TCGCGTGGTC 
TGGGCCCATG ATGCCCCCCG GCTTGGCCAT GCCGACGACA TTCTCTCCGC CTTGCAGCAT 
ACCTGCCGCC GGCTCCACAG CGAACGCGGC GCCGACCTGT TTCGTCTCGA TACGCCCGAG 
GTCCTGCCGC GTCTGACGCG CCGCAATCTG TTGCGTCGAC GCACCGCCTC GGCTCTGGCC 
GAGGATCGCT TCTGTCTGCA CTATCAACCC CAGGTCAGCG TGCGCGACTT TCGCGTGCAC 
GGCTTCGAGG CGTTGCTGCG CTGGCACGAT ACAGAATTGG GGTGGGTCAA CCCTCAGGAT 
ATCGTCGACA TCGCCGAAGA AATCGATCTC GGCGATCAAC TGGATATCTG GGTCTTGCGG 
CGGGTCATGC GACAGCTTTC CGTATGGCGG GATCGCGGGC ACGACGTGTT GCCGGTGGCG 
CTCAATATCT CGCAGGAACA GCTCGCCCGG CCTGCCTTCG CCGACCGGTT CTGCGCATTG 
CTTGCCCAAT ACCGCTTGCC GGGCCGCCTG CTCAAGCTGG AAGTACTGGA ACGCTCGCTG 
ATCGACGACC CCGAGGCCAT CATCGAGAGC ATGCAACGCC TCAAGCGTCA TGGCGTGGGC 
TTCGCCATCG ACGACTTCGG CACCGGTTAC TCGTCGCTCG CCTACCTCAC GCGCATCCCC 
TTCGACACGC TCAAGATCGA CAAGAGCTTC ATCGAGCGCA TCGGCGACGA CCCGCGCGTG 
GGCTCACTGG TACGCTCGAT CATCTCGCTG GGACGCGATG CCGGCATGCA TGTCGTCGCC 
GAGGGCGTGG AAACCGACGC CCAGGTCCAG CGCCTGCGCG ACTTTCACTG CCACAGCATA 
CAGGGCCATG TGTTCTCGGG CGCCCTGCCT CCGACGCATG CCGAAGCGTT GCTTCACAAC 
GTCGCGAACG TCACCCCGCC CGGCCAGTGA 

 

Protein sequence

MSHSAFRRNR ANRASARRRL VLTFLAPGCL HGSAQALPPA CLHDAGPGIA TREHCMVNVP 
GVAAPDHPDE TRRLDELHRL GLMDTPPEKR FDDITRLAAR VFGVPIVLIT LVDRHRQWFK 
SRFGIDACET SRDNAFCAHA LLERKLLVIE DTTRDARFRD HPLVTETPYI RFYAGAVIRT 
AAGLPLGTLC LIDRHPRHFD ASQREILLDL ARLVENEIGD DAIMRLERAR AEIGTQFDPQ 
TRLATQQRFQ QLIEARLNAL SDDDTLCGVA AVDLYGMRAI RTRFSLQVSN NVLMRCIARV 
EKALDGFVFD LARIDDQRLG VLLYRGDATR MAATMEALAT TLRAPYIAAG KTVTAAARVV 
WAHDAPRLGH ADDILSALQH TCRRLHSERG ADLFRLDTPE VLPRLTRRNL LRRRTASALA 
EDRFCLHYQP QVSVRDFRVH GFEALLRWHD TELGWVNPQD IVDIAEEIDL GDQLDIWVLR 
RVMRQLSVWR DRGHDVLPVA LNISQEQLAR PAFADRFCAL LAQYRLPGRL LKLEVLERSL 
IDDPEAIIES MQRLKRHGVG FAIDDFGTGY SSLAYLTRIP FDTLKIDKSF IERIGDDPRV 
GSLVRSIISL GRDAGMHVVA EGVETDAQVQ RLRDFHCHSI QGHVFSGALP PTHAEALLHN 
VANVTPPGQ