| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_3238 |
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| Symbol | |
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| ID | 4028572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | + |
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| Start bp | 3608033 |
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| End bp | 3609214 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637968453 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_575281 |
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| Protein GI | 92115353 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAGGT TCGTCCAGAA GCGCATGCCG AGATCAGGGC TGACTCACGG CCTGGGCGTC
ATGCTCGTCA TCGCGCTGCT GACCGGCTGC GACGCCCATG GCGAGGCGGA ATCCGCCAGT
ACGCCGCCGC CCCCGGAAGT GGATGTGGCC ACGGTGCTGG TGGAGCCGGT CACGCTGCGC
GAGACCTTCA CCGGCCGCGT GGCGTCGCCG CAGACCGTGC AGGTTCGGCC ACGGGTGAGC
GGCTATATCG ACGAGGTCGC CTTCGAGGAA GGCGAACTGG TCGAGGCCGG CGATCTGCTG
TTCCGCATCG ACCCCCGCCC CTACGAGGCT CGCGTCCAGG CCGCCAAGGC CTCGTTGGCA
CAGGCGCAGA GTCAGCGCCG TCTCACCGAC GTCGAGGCGG ATCGGTCCCG CCAGTTGATC
CAGAAACACA TGATTTCTCA GGAGCAGCAC GATCAGCGCC AGGCAGCCGC GCTCAATGCC
CGGGCGCAGC AAGCGGAAGC CGAAGCCGCA CTGACCAGTG CCGAGCTGGA CCTGCAGTAC
ACCCGGGTCA CCGCACCGGT GGCCGGCCGC ACCGGTCGCG CCATGATCAC CCAGGGCAAC
CTCGCCAGTG CCGATCAGTC GGTGCTGACC ACGCTGGTGT CGATGGATCC CTTGTACGTC
TACTTCGACA GCAACGAAAC CGAAGCCCAG GGGACGCAGA CACTGATGGC CCGGGGCGAG
CCCCTGACGC TGAACATCGG CCTGACCGGC GAGACGGGCT TCCCCCATCA GGGACAGCTG
GATTTCGTCG ACAACCAGAT CAACGCCGAT ACCGGCACGC TGCGCTATCG CGCCGTTCTG
CCCAATCCGG ATGGCCTCTT CAGGCCCGGC CAGTTCGCGC GTGTGGAAAT GCCCGTGGCT
CACCTCGAGC AGGCCGTGCT GGTGAATCGC AAGGCCGTGC TCGCCAATCA GGATCGACGC
TTCGTCTACG TGGTCGGCAA TGACGCCACC GTGACCCCCC GTCAGGTGGA GCTCGGCCGC
GAGGTGGGAG AGCTGGTGGT GATCCGCGAC GGGCTGAAGG CCGGTGAGCG GGTGATCGTC
AACGGTACCC AGAAGGTGTT CGCCCCCGGC ATGCCGGTCA CGCCGAACCC GGTGGCCATG
CGCGAGCCGA ACGCCGGCAA CGACATCGCC ACGCGGTCCT AG
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| Protein sequence | MKRFVQKRMP RSGLTHGLGV MLVIALLTGC DAHGEAESAS TPPPPEVDVA TVLVEPVTLR
ETFTGRVASP QTVQVRPRVS GYIDEVAFEE GELVEAGDLL FRIDPRPYEA RVQAAKASLA
QAQSQRRLTD VEADRSRQLI QKHMISQEQH DQRQAAALNA RAQQAEAEAA LTSAELDLQY
TRVTAPVAGR TGRAMITQGN LASADQSVLT TLVSMDPLYV YFDSNETEAQ GTQTLMARGE
PLTLNIGLTG ETGFPHQGQL DFVDNQINAD TGTLRYRAVL PNPDGLFRPG QFARVEMPVA
HLEQAVLVNR KAVLANQDRR FVYVVGNDAT VTPRQVELGR EVGELVVIRD GLKAGERVIV
NGTQKVFAPG MPVTPNPVAM REPNAGNDIA TRS
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