Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_3235 |
Symbol | |
ID | 4028569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 3603996 |
End bp | 3606131 |
Gene Length | 2136 bp |
Protein Length | 711 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637968450 |
Product | (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA |
Protein accession | YP_575278 |
Protein GI | 92115350 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCACCA TCGACGATCT GGCAGACCGG CTGGGCGGCT ACTTGCCGCC CGAGGAAATA CTGCAGGTCA AGCGCGCCTT CTATTACGCC GAGCAGGCCC ATGACGGCCA GCGTCGGCGC TCCGGCGAAC CCTACGTCAC GCATCCGCTG GCCGTCGCCA ACATCCTCGC CAACATGCAC ATGGACCACC AGAGCCTGAT GGCCGCCATG CTGCACGACG TCATCGAGGA CACCGGCATC ACCAAGGAGG CGCTGGCGCG TCAGTTCGGC GACCCCGTGG CCGAGCTGGT CGACGGCGTC TCCAAGCTGA CCCAGATCAC CTTCGAGGAC AAGGCGGTCG CCCAGGCGGA AAACTTCCAG AAGATGGTCC TGGCGATGTC CAAGGACATC CGCGTGATCA TCGTCAAGCT CGCCGACCGC CTGCACAACA TGCGCACGCT CGGCGCGCTG CGTCCGGACA AGAAACGCCG CATCGCCCGC GAGACGCTGG AAATCTACGC CCGTATCGCC AGCCGCCTGG GCATCAACAC CATTCGCGTC GAGCTCGAGG ATCTTTCCTT CCAGGCGATT CATCCGATGC GCGCCGAGCG CATCAAGCGC GCGGTCACCA AGGCGCGCGG CAATCGTCGC TCGATGATGC GCCAGATCCA GGACAGCCTG CAGAAATGCC TCGACGACGA CGCGCTCGTG GGCAGCGTGG TCGGGCGCCA GAAGCACCTG CTGTCGATCT ATCGCAAGAT GCGCGACCAG CGCAAACCCT TCGTCGAGAT CATGGACGTC TTCGGGTTTC GCATCATCAC CGACGACGTG GATACCTGCT ATCGCATCCT GGGCGCGGTG CACAACCTCT ACAAGCCGGT GCCGGGGCGC TTCAAGGACT ATATCGCCAT CCCCAAGGCC AACGGCTACC AGAGCCTGCA CACCACGCTG TTCGGCCCCA ACGGCATGCC CATCGAGGTA CAGATCCGTA CCCGCGAGAT GGAGGCGATG GCCAACAACG GCATCGCCGC GCACTGGCTC TACAAGGCCG GCCAGACCGA GCGCCCCATC GGCGCCGGCA GCCATGCCCG GGCCCGTGAG TGGGTGCGCG GCCTGCTCGA GATGCAGCGC CACGCCGGCA ACTCCCTGGA ATTCATCGAA CACGTCAAGA ACGACCTGTT CCCCGACGAT ATCTACGTGT TCACGCCCAA GGGCGACATC ATGGAGCTGC CCGGCGGTGC CACCGCGGTG GACTTCGCCT ATACCGTGCA TACCGACATC GGCAACAGCT GCATCGCCTG TCGCATCGAC CGTCATCTGG CACCGCTTTC CTCGACGCTG GAAAGCGGCC AGACGCTGGA GATCATCACC GCTCCCGGCG CTCGTCCCAA CCTCGCCTGG CTCAATTTCG TGGTCACCGC CAAGGCACGT TCGGCGATCC GCCATGCGAT CAAGCATCAG CAGCGCACCG AGTCCGTGCA GCTGGGCCGG CGTCTGCTCA ACCGTGCGCT GGGCGCCTTC GAGACCAGCC TCGAGGAACT GCCCGAGCCG CGCATGGCGG CGGTGCTCGA CGAGCTGGAA CTCAAGCACG AAGATGATCT GCTCGAATCG ATCGGGCTCG GTACCCGCAT GGCCTATGCC ATCGCCCGGC GCCTGCTGGC CTCCACCGAG CCTGCGAGCG CCGAGGAGGT CGCGACCTCG CCGCATTCCG GCGGACCAAT CGTGATCAAC GGTGCCGAGG GCATGGTGAT CAGCTTCGCG CGTTGCTGCT ATCCGTTGCC CGGCGATCCG GTCATCGGCC ATCTCTCGGT CGGCAAGGGG ATCGTGGTGC ATCGCCATGA CTGTGGTAAC CTGCAGGAGC TGCGCGACGA CCCCGACAAG CTGTTCGCCC TGGAGTGGTC GCAGCAGATC GACCAGGACT TTCCGGTGGC GCTGCGTCTC CACGTCGAGA CGCGACGCGG CCTGGTCGCC GAACTGGCCG GCCTGGTGAC CGATGCCGAT GCCAACATCG AGCGCATCGG CATCGAAGAA CGCGACGCAC GCCTGTCGAT CGTCAACTTG ACGCTGGCGG TCCATGACCG CGTGCATCTG GCAAGTATCA TGAAACGACT GCGCAACCTG CCCCACGTCG GCAAGATCAC CCGCGTTCGC AGTTAA
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Protein sequence | MFTIDDLADR LGGYLPPEEI LQVKRAFYYA EQAHDGQRRR SGEPYVTHPL AVANILANMH MDHQSLMAAM LHDVIEDTGI TKEALARQFG DPVAELVDGV SKLTQITFED KAVAQAENFQ KMVLAMSKDI RVIIVKLADR LHNMRTLGAL RPDKKRRIAR ETLEIYARIA SRLGINTIRV ELEDLSFQAI HPMRAERIKR AVTKARGNRR SMMRQIQDSL QKCLDDDALV GSVVGRQKHL LSIYRKMRDQ RKPFVEIMDV FGFRIITDDV DTCYRILGAV HNLYKPVPGR FKDYIAIPKA NGYQSLHTTL FGPNGMPIEV QIRTREMEAM ANNGIAAHWL YKAGQTERPI GAGSHARARE WVRGLLEMQR HAGNSLEFIE HVKNDLFPDD IYVFTPKGDI MELPGGATAV DFAYTVHTDI GNSCIACRID RHLAPLSSTL ESGQTLEIIT APGARPNLAW LNFVVTAKAR SAIRHAIKHQ QRTESVQLGR RLLNRALGAF ETSLEELPEP RMAAVLDELE LKHEDDLLES IGLGTRMAYA IARRLLASTE PASAEEVATS PHSGGPIVIN GAEGMVISFA RCCYPLPGDP VIGHLSVGKG IVVHRHDCGN LQELRDDPDK LFALEWSQQI DQDFPVALRL HVETRRGLVA ELAGLVTDAD ANIERIGIEE RDARLSIVNL TLAVHDRVHL ASIMKRLRNL PHVGKITRVR S
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