Gene Csal_3226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_3226 
Symbol 
ID4028560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp3595518 
End bp3596723 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content68% 
IMG OID637968441 
Productputative ABC transporter solute-binding protein 
Protein accessionYP_575269 
Protein GI92115341 
COG category[R] General function prediction only 
COG ID[COG4134] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0901142 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTATT CGCGAGGCTT GCTGGTAGCG GCGTTGTCGC TGTTGCCGAC CATGGGGCAG 
GCATACGAGT TGTCCGACTG GGAATCGGTG ACCGAGGCGG CCCGGGGGCA GACCGTCTAC
TGGAATGCCT GGGGCGGCGA TCCGCGTACC AACGCCTATA TCGACTGGGT GGCCGAGCAG
GTCGACAAGC GCTACGCAAT CGACCTCGAG CACGTCAAGG TGGGCGATAC CGGCGAGGCG
GTGACCCGTG TGCTGGCCGA GAAGGCGGCG GGTAACGACG AGCAGGGTGC GGTCGACCTG
ATCTGGCTCA ATGGCGAGAA TTTCGCCGCC ATGAAGGACA ACGACCTGCT CTATGGCCCC
TGGGCCGAGC AGCTGCCCCA CTTCCCGCTG ACCGCGCCCG AGCAGAACCC CGAGGTGCGC
GAGGACTTCA CCCTGCCGGT CGAGGGCTAC GAAGCGCCCT GGGGACGTGC GCAGATCACC
TTCTATTACG ACAGCGCGCG TGTCGACGCG CCGCCGCGCA GCATTCCCGC ACTGCTCGAC
TGGGCCCGGG CGCATCCGGG GCGCTTCACC TATCCCCAGC CGCCGGCCTT TCTGGGCACG
ACCTTCCTCA AGCAGGCACT GCTGGCCTTG ACCGAGCACC GCGAGGCGCT TTATGCACCG
GTCGACGAGG CCGATTTCGA GTCCGTCACC GCGCCGCTGT GGGCCTACCT GGACCGCTTG
CATCCCACTC TGTGGCGCGA GGGCGAGAGC TTCCCCGCGG GCGGGCCTCA GATGCGCCAG
CTGATGGGCG ACGGAGCGTT GAGCCTGGCG TTCACCTTTA CCCCCTCCGC CCCGGCCGCC
GCGGTCCTCG ATTATCAACT GCCACCGACC ACGCGCAGCT ACATCCTCGA CGATGGCACG
CTGGGCAACG TGCATTTCGT CGCCATTCCC TTCAATGCCC AGCACAAGGC CGGCGCCTTG
ACGGTCGCCA ACTTCCTGCT CTCGCCCGAG GCCCAGGCCC GCAAGCAGGA TCTCTCGTTG
TGGGGCGATG CCACGGTGCT GGACATGTCG CGCCTGAGCC CCAAGCAGCG TGAGGCGTTC
GCGCGCGATG GCCGGGCCGC CGAGAGCCTG CCGCCGCCCT CCCTGGGCGA GACGCTGCGC
GAACCCCATC CCTCCTGGAT CGAGCCGCTC GAGAAGGCCT GGCGGCAGCG TTACGGCGCG
CAATGA
 
Protein sequence
MTYSRGLLVA ALSLLPTMGQ AYELSDWESV TEAARGQTVY WNAWGGDPRT NAYIDWVAEQ 
VDKRYAIDLE HVKVGDTGEA VTRVLAEKAA GNDEQGAVDL IWLNGENFAA MKDNDLLYGP
WAEQLPHFPL TAPEQNPEVR EDFTLPVEGY EAPWGRAQIT FYYDSARVDA PPRSIPALLD
WARAHPGRFT YPQPPAFLGT TFLKQALLAL TEHREALYAP VDEADFESVT APLWAYLDRL
HPTLWREGES FPAGGPQMRQ LMGDGALSLA FTFTPSAPAA AVLDYQLPPT TRSYILDDGT
LGNVHFVAIP FNAQHKAGAL TVANFLLSPE AQARKQDLSL WGDATVLDMS RLSPKQREAF
ARDGRAAESL PPPSLGETLR EPHPSWIEPL EKAWRQRYGA Q