Gene Csal_3217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_3217 
Symbol 
ID4028551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp3585560 
End bp3586888 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content58% 
IMG OID637968432 
Producttype III effector Hrp-dependent outers 
Protein accessionYP_575260 
Protein GI92115332 
COG category[S] Function unknown 
COG ID[COG3395] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAAC TCTTGGCCGC CTTCTATGGC GATGATTTCA CAGGCTCGAC GGAAAACTTG 
GCGCAATTCT GCCGCCATGG GCTTCGGGGC AGGTTATTCT TCACCAGCAG CAACCGAGAG
GCGATTCTTG AGATGGCCTC CGAACTGGAC GTAGTGGGGT TGGCAGGCAC AGCTCGTGGC
CTGGCTCCCT CGGCAATGAC AGAAGAAGTG GACCCTGCTC TAGCCTTGTT AGACACCCTA
AGTCCCCGCC TCAAGCAGTT TAAGGTTTGC TCGACTTTCG ATTCCTCGCC CACGGTCGGC
AGCATAGGGC ATGTCATGGA TCTAGCCCGA CGCCGATGGC CGGAATGTGC TCTTCCCATC
TTGCCTGCCA CGCCGGCTTT TGGTCGGTAC ACGGCCTTTT CCCATCTGTT TACACGTTAT
GAAAACGAAA TATGCCGTCT GGATCAGAAC CCTGCGATGG CATATCACCC ATCGACCCCA
ATGGGCGAAG CCGACCTACG ACGTCACCTC ATGGCGCAGA CCGCCATCCC TCCGGCAGCA
GTCACGTTAC TGGATTATCA ACAGCCTGAT GGCGGCTGGC AGTGCTTGGC ATCCGCCGTG
GAAGAGCAAC GCTTCGTGGT TATGGATGCG ACACAAGCAG CCGAGATACA CCATGCCGCC
AAGCTTATTC TTAAGCTTGC CGAGCGACAT CCTACCCTTG CAGTAGCGGC GCAGGGTCTG
GCCGATGCCC TAGGTGGACT GGTTACGCGC GACATGGAAC AACGCGAGCC ACTGCCCACG
ACGTATCCTG GAGTGGATAG GCTACTGGTG CTATCCGGCA GTTGCTCGCC TCAGACCCGT
AAGCAACTCG CGCACATGGA AGCGCAAGGC GGCTGCATCG TGGCAATATC ACCCATGGAG
GCATTGCGTT CCCCCAGTGC ACTATCGGAA AGGCTCGCCC AGGAAGTAAT GGAGGCCTTC
ACTCAGAGCC AGACAGTCGG TATCGCAACT ACGTTCCAAG ACACCGATCT CGTCGACGGG
CTGGCTAGTG ATCGTTTATC GCTGGCAGTG GGAGAAGCAT ACGCTCTATT GGCTCAGCAC
CTTCGGAGAG AAACGGCCAT CCCCCGTATC GTCTTCGCCG GCGGTGACAC ATCCAGCCAT
GCCATGCGCC GTATCGGCGC TGATGCCTTG GAGTTGGTTG CTTTTGATGA AGCACAGGGC
GGTCACCTTT GTCGCCTAAT CGCTCCAGGC TCACCGATAG AGGGGTTGGA GGTAGTGCTC
AAGGGCGGCC AGATCGGAGG AGAAGACTTC TTCTCGAGGG CACAGCAAGG CACATCACCA
CGGGTATAA
 
Protein sequence
MKQLLAAFYG DDFTGSTENL AQFCRHGLRG RLFFTSSNRE AILEMASELD VVGLAGTARG 
LAPSAMTEEV DPALALLDTL SPRLKQFKVC STFDSSPTVG SIGHVMDLAR RRWPECALPI
LPATPAFGRY TAFSHLFTRY ENEICRLDQN PAMAYHPSTP MGEADLRRHL MAQTAIPPAA
VTLLDYQQPD GGWQCLASAV EEQRFVVMDA TQAAEIHHAA KLILKLAERH PTLAVAAQGL
ADALGGLVTR DMEQREPLPT TYPGVDRLLV LSGSCSPQTR KQLAHMEAQG GCIVAISPME
ALRSPSALSE RLAQEVMEAF TQSQTVGIAT TFQDTDLVDG LASDRLSLAV GEAYALLAQH
LRRETAIPRI VFAGGDTSSH AMRRIGADAL ELVAFDEAQG GHLCRLIAPG SPIEGLEVVL
KGGQIGGEDF FSRAQQGTSP RV