Gene Csal_3199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_3199 
Symbol 
ID4028725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand- 
Start bp3566548 
End bp3567216 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content51% 
IMG OID637968414 
ProductGntR family transcriptional regulator 
Protein accessionYP_575242 
Protein GI92115314 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.405937 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAGA TCAAGCAGAA CACGCTACAT GGTGAAGTCG CTGTACGTAT TCGTGATATG 
ATCGACGCGG GTACGCTGAC ACCCGGGAGC CGTGTTCCTG AAAAACAGCT CTGTGAACAA 
TTTGGCGTCT CGCGCACCCC CCTGCGAGAA GCCTTGAAAG TATTGGCTTC GGAAGGATTT 
GTAGAACTTC TGCCGAACCG AGGTGCACGC ATCTCCAAAC TGACCATCGA TACTTTACAG 
AATACGCTGG AAGTTATGAG TGCACTCGAG GGGTTGTCCG GCGAACTGGC TTGCGCACAT 
GTTACCGATG CCGAACTCGC TAATATAGAA GCATTGCACT ATCAAATGCT GGCTCATTAC 
AAGAATTCCA ACATGGCCGA GTATCTGTTG ACCAACCAGC AGATACATGA AGCAATCGTG 
GTTGCCTCCC GCAATGATGT GCTGATTGAT GTCTACAAGA ACTTGAATCA GAGGGTTCGG 
CGTGTTCGTT TTTCCGCCGA GCTCAGCAGA GAGTACTGGG CTAAAGCGGT ACAGGATCAC 
GAGGATATTA TCGACGCTCT TCGTCGCCGA GATGGCGAGA CACTGGGAAA AATTCTGCGC 
CGCCATCTCA GCGATAAAGT TGAGGTGTCT TCCCTGTCTG ATATGGCGGA GCCCAAGAGT 
ATGTCATGA
 
Protein sequence
MDKIKQNTLH GEVAVRIRDM IDAGTLTPGS RVPEKQLCEQ FGVSRTPLRE ALKVLASEGF 
VELLPNRGAR ISKLTIDTLQ NTLEVMSALE GLSGELACAH VTDAELANIE ALHYQMLAHY 
KNSNMAEYLL TNQQIHEAIV VASRNDVLID VYKNLNQRVR RVRFSAELSR EYWAKAVQDH 
EDIIDALRRR DGETLGKILR RHLSDKVEVS SLSDMAEPKS MS