Gene Csal_3180 details

Gene Information

• Locus tag: Csal_3180
• ID: 4028705
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chromohalobacter salexigens DSM 3043
• Kingdom: Bacteria
• Replicon accession: NC_007963
• Strand: +
• Start bp: 3545780
• End bp: 3546439
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637968394
• Product: putative aldolase
• Protein accession: YP_575223
• Protein GI: 92115295
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.438286
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCCACA TCAGCACCAC GATCAACGAA AACCGCCTGC GCGAGGAGAT TGCCGAGATC 
GGCCGTTCCT TCCGGCTACT GGGCATGGCG CCGGGCACTT CCGGCAACAT CAGCGCCAGA 
CTCGATGACG GCTGGCTGAT GACGCCGACC AACGCCAGCC TCGGTGCCCT CGATCCCGCC 
GCGATTTCCA AGCTGGACTG GGACGGCAAC CTGCTCGACG GCGAGCCACC GACCAAGGAG 
TCGTTCCTGC ACCGCGCCTT CTACGATCAG CGTCCCGATA CCGGCGGCAT CATTCACCTG 
CATGCCACGC ACTCGGCGGC GGTCTCGTGT CTCAACGGCC TCGATGAACG CTCCTGCCTG 
CCCCCCATCA CGCCGTATTT CGTCATGCGC GTGGGGCGTT TGCCGTTGAT TCCTTACTAT 
CGTCCCGGCG ATCCCGCCCT CGGCGACGCG ATACGCGAAC ATGCCAAGTC CCATGGCGCG 
GTGTTGCTGG CCAACCACGG CCCCGTGGTG GCGGGCAAGA CACTGGAAGC GGCACGCAAC 
GCCATCGAGG AACTGGAAGA AACCGCCAAG CTGTATCTCC TGCTGCGCCA GCACGACGTA 
CGCACCCTGG GCGAAGCGGA AATCGATGAG CTTCGTCAGG CCTTCGGCGC CCACTGGTAA 

 

Protein sequence

MSHISTTINE NRLREEIAEI GRSFRLLGMA PGTSGNISAR LDDGWLMTPT NASLGALDPA 
AISKLDWDGN LLDGEPPTKE SFLHRAFYDQ RPDTGGIIHL HATHSAAVSC LNGLDERSCL 
PPITPYFVMR VGRLPLIPYY RPGDPALGDA IREHAKSHGA VLLANHGPVV AGKTLEAARN 
AIEELEETAK LYLLLRQHDV RTLGEAEIDE LRQAFGAHW