Gene Csal_3177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_3177 
Symbol 
ID4028702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp3542792 
End bp3543547 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content67% 
IMG OID637968391 
ProductGntR family transcriptional regulator 
Protein accessionYP_575220 
Protein GI92115292 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCACCG ATCCAGAGAC TCGACCGACC CGTGGTACCC AACTCTCGGA GCAGGTCGCA 
CGGCAGCTGA CGCACGCCAT CCATACCGGC GAGATGCGCC CCGGGGAGCG TTTGCCCACC
GAGGCGGCGC TCGGCGAACG CTATGGCATC AGCCGCTCGG TGGTGCGCGA AGCCATTTCC
ATGCTGCGTA ACGCCGGCCT GGTCACATCG CGTCGCGGCA GCGGCAGCTT CGTCGCCGAG
GTCCCCACCG TGGCGCTGCG CCTGGCGATT CCCGACCCAT CGCTGCAATC GATCATCCGT
CTTCTCGAAT TGCGCCGGGC CCTGGAAGTC GAGGCGGCGC GTCTGGCGGC GCAGCGCCGC
ACCCCCTCCC AATTGCGCCG TATTCGCAAT GCTATGGCCG ACATCGACGA GGCTGTCGAA
GTCGGCTCCG ACGGCGTCGA TCAGGACATG GCCTTTCACC GCGCCATCGC CGAGGCGTCG
AACAACACGC ACTTCACGGC GATCATCGAC TTCTACAACC GCTTCCTGCA TCACGCCGTT
ACCGTGACGC GAACCAATGA GTCGCTGCGC GAAACGTTCA TGGCGCAGGT CATCGAAGAG
CATCAAGCGA TCGTCGACGC CATCGCCCAG GGCGACGAAG AGGCCGCCGC CCAGGCCGCC
GCGCGCCACC TCGAGCATGC CGAGTGGCGC CTGCGCCAGG CGCCGACGGA CCTGCTGGAA
CGCATCGAGG ACACCGGAAC CGACACGTCG GCCTGA
 
Protein sequence
MITDPETRPT RGTQLSEQVA RQLTHAIHTG EMRPGERLPT EAALGERYGI SRSVVREAIS 
MLRNAGLVTS RRGSGSFVAE VPTVALRLAI PDPSLQSIIR LLELRRALEV EAARLAAQRR
TPSQLRRIRN AMADIDEAVE VGSDGVDQDM AFHRAIAEAS NNTHFTAIID FYNRFLHHAV
TVTRTNESLR ETFMAQVIEE HQAIVDAIAQ GDEEAAAQAA ARHLEHAEWR LRQAPTDLLE
RIEDTGTDTS A