Gene Csal_3173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_3173 
Symbol 
ID4028640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp3538016 
End bp3539005 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content69% 
IMG OID637968387 
Product3-hydroxyacyl-CoA dehydrogenase, NAD-binding 
Protein accessionYP_575216 
Protein GI92115288 
COG category[I] Lipid transport and metabolism 
COG ID[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCGAC AAGACACGGC CGCGGCGGCC GATGTGCCCG CGCGGGTCGC CGTCATCGGC 
ACCGGCGTGA TCGGCAATGG CTGGATCGTG CGAGCCCTGG CGGCGGGCTG CGATGTCGTG
GCCTTCGACC CGGCCCCCGG CGCCGAGGCA ACGACGCGCG CCTTCGTGGA ACGGGTCTGG
GAATCGGTGG CGACGATGGG CCTTGCCGAC ACGGCGGACC CGAGTCGGCT GCGTTTTGCG
GCCTCGGCCA TCGAAGCCGT CGAGGAGGCC GATCTGGTCC AGGAAAACGT GCCCGAGCGA
CTCGAGATCA AGCATCGCGT CCTGGCGGAG CTGGATGCAC ATGCCCCCGA GGGCGTGGTG
ATCGGCTCCT CGACGTCCGG CATCAAGCCC AGTGAACTGC AATCAGCCTG CACGCGCGAC
CCCGGTCGCG TCATCGTCGC GCACCCGTTC AACCCGGTGT ACCTGCTGCC GCTGGTCGAG
CTGGTGGGCG GTGAGCACAC CGCGCCGGTC GTCACCGAAC GCGCCCGGGC TCAGTATGCC
GCGCTGGGCA TGCGGCCGCT GGTGGTGCGT CGCGAAATCG AGGGCCATGT GGCCGACCGC
CTGATGGAAG CCCTGTGGCG CGAGGCGCTG CACCTGGTCA ACGACGGTGT CGCCACTACC
GAGGAAATCG ATGCCGCCGT GGTCTACGGT GCGGGGTTGC GCTGGTCGCT GATGGGCACC
TTCCTGACTT TCCACCTGGC CGGGGGCGAG GGCGGCATGC GTCACATGCT GCACCAGTTC
GGGCCGGCAC TGAAATTGCC GTGGACCAAG CTCGAGGCGC CGGAGCTGAC CGACGAGCTG
ATCGAGAAGG TCGCCGACGG CTGCGAGCAT CAGGCCGCCG GGCGCAGCGT CGCCGAACTG
GAAACGCGGC GTGACGCCTT CCTTACCGAG CTGCTGGCAT TGACCCGCAA GTACTGGCCG
GAAGCCGAGG GGCTCGAGGG GCGCATCTGA
 
Protein sequence
MSRQDTAAAA DVPARVAVIG TGVIGNGWIV RALAAGCDVV AFDPAPGAEA TTRAFVERVW 
ESVATMGLAD TADPSRLRFA ASAIEAVEEA DLVQENVPER LEIKHRVLAE LDAHAPEGVV
IGSSTSGIKP SELQSACTRD PGRVIVAHPF NPVYLLPLVE LVGGEHTAPV VTERARAQYA
ALGMRPLVVR REIEGHVADR LMEALWREAL HLVNDGVATT EEIDAAVVYG AGLRWSLMGT
FLTFHLAGGE GGMRHMLHQF GPALKLPWTK LEAPELTDEL IEKVADGCEH QAAGRSVAEL
ETRRDAFLTE LLALTRKYWP EAEGLEGRI