Gene Csal_3172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_3172 
Symbol 
ID4028639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp3537531 
End bp3538016 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content67% 
IMG OID637968386 
Producthypothetical protein 
Protein accessionYP_575215 
Protein GI92115287 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCGGA CACCAGACAG CTCAACGTTC GGCCCCTTGC TGGAAACCCG GGTGGCCGAC 
GCCTGGGTCG ACTACAACGG CCACATGAAC GATGCCGAGT ATGCGCGGGT CTTCTCGCTG
GCCGTCGAGG CGCTGATGGA GCGTATCGGC CTGGATATGG CCGGACGAGC CGAGCATGGT
TACACGCTCT ATACCCTCGA GACGCACCTC TGCTATCGAA AGGAGGCGCA TCGCGGCGAG
GCATTGACGG TGACGCTCCT GCTGCTCGAT AGCGACAGCA AGCGATTGCA TGTGCTCTTC
ACGCTCACCA ACGCCGCCGG CGAGACGCTG GCGACCAGTG AGCAGATGCT GATGGGCATC
GACATCGAAA GCGGGCGGCC GGCGGCGTTT CCGGCGCCGG TCGCCTCGGC GCTCGAGGCG
CTCCCCCGGG CAGGCGAGGA GTGGCCCCGG GCCGCCGGGC GGCGCATCGG CATACCGCGT
CGCTGA
 
Protein sequence
MSRTPDSSTF GPLLETRVAD AWVDYNGHMN DAEYARVFSL AVEALMERIG LDMAGRAEHG 
YTLYTLETHL CYRKEAHRGE ALTVTLLLLD SDSKRLHVLF TLTNAAGETL ATSEQMLMGI
DIESGRPAAF PAPVASALEA LPRAGEEWPR AAGRRIGIPR R