Gene Csal_3120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_3120 
Symbol 
ID4028761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp3473916 
End bp3475346 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content68% 
IMG OID637968334 
Productproton-translocating NADH-quinone oxidoreductase, chain N 
Protein accessionYP_575163 
Protein GI92115235 
COG category[C] Energy production and conversion 
COG ID[COG1007] NADH:ubiquinone oxidoreductase subunit 2 (chain N) 
TIGRFAM ID[TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.545903 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTCGT TGCTTGCTCT TTCGCCGCTG ATCCTCGTCT GCGCCACGGC CATCGTGGTG 
ATGCTGACCA TCGCCTGGCG TCGGCACCAC GAGCTGACGG CGACTCTGAC CGTGGTGGGG
CTCAACCTGG CGCTGGCGGC GCAGGTCGTG GCGTGGTGGC AGGCGCCGGT GAGCGTGACG
CCGCTGATGA CGGTGGACGG CCTGGCGGTC TTCGGTGGCG TGTTGATTCT GATCGCCACA
CTGGCCTGTG CCACCCTCGG TCATGCGTAC CTGGAAGGCG CGCAGGGCCC CCGCGAGGAG
TATTACCTGC TGCTGCTGTG TGCCGCCGCC GGGGGGCTGG CGCTGGTGAG CAGCCGGCAT
CTGGCCGCGC TGTTCTTCGG CCTGGAACTG CTGTCGATGC CGCTCTATGG CATGCTGGCC
TACACCTACC GCGAGCGCGG GGCGCTGGAG GCGGGCATCA AGTACATGGT GCTTTCCGCA
GCCGCCTCCG CCTTCCTGCT GTTCGGGATG GCGCTGTTGT ATTCGCGCAC CGGGCATCTC
GACTTCGCCG GCCTTGGCGA GGCGCTGGCC ACGGCCGGCG GCGACGGCTG GCTGATGGCT
GGCATGGGCA TGATGCTCAT CGGGCTGGGC TTCAAGCTCT CCATCGTGCC GTTCCACTTG
TGGACGCCGG ATGTCTACGA GGGAAGCCCC GCCCCGGCGG CCACCTTCCT GGCCTCGGCC
AGCAAGGTGG CGGTGCTGCT GGTGTTGCTG CGCCTGCTGC AGAGCTCCCC CGTGCAGGAT
GCCTGGCTGC ACAGCCTGCT GGCGGTGCTG GCCTTCGTGA CCATGCTGGT GGGTAACCTG
CTGGCCTTGA CCCAGAACGA CCTCAAGCGC CTGCTGGGGT ATTCCTCGAT CGCGCATTTC
GGCTATCTGC TGGTGGCGCT GGTGGTCAAC GACGGTCTGG CCGCGGAGAC CGCCGCGCTC
TATCTGGTGA CCTATGTCCT GACGACCCTG GGCGCCTTCG GTGTGGTGAC GCTGCTGTCG
AGCCCCTATT CGGGAGCGGA TGCCAGCCAG CTGCACCATT ACCGGGGGCT GTTCTGGCGG
CGCCCCTACC TGACCGCCGT GCTGACGGTC ATGATGCTGT CGCTGGCGGG GATTCCTTTC
ACCGCCGGGT TCATCGGCAA GTTCTACATC GTGGCGGTGG GCGTCGAGGC GAGTCGCTGG
TGGCTGGTCG GCGGTGTCGT GGCCGGCAGT GCCATCGGTC TTTACTACTA CCTGCGGGTG
ATGGTGACGC TCTTCCTGCC GGAGCCGGGC ATGCAGCGGC GCGACGCCAC CACGGACTGG
GCACAGCGTG CCGGCGGCGT GGTGGTGCTG GGACTGGCGG CGCTGGTCGT CGTGCTGGGG
GTCTATCCCG CGCCGATGAT CGATTGGGTC CGGTTCATGG TCGCCGGCTG A
 
Protein sequence
MTSLLALSPL ILVCATAIVV MLTIAWRRHH ELTATLTVVG LNLALAAQVV AWWQAPVSVT 
PLMTVDGLAV FGGVLILIAT LACATLGHAY LEGAQGPREE YYLLLLCAAA GGLALVSSRH
LAALFFGLEL LSMPLYGMLA YTYRERGALE AGIKYMVLSA AASAFLLFGM ALLYSRTGHL
DFAGLGEALA TAGGDGWLMA GMGMMLIGLG FKLSIVPFHL WTPDVYEGSP APAATFLASA
SKVAVLLVLL RLLQSSPVQD AWLHSLLAVL AFVTMLVGNL LALTQNDLKR LLGYSSIAHF
GYLLVALVVN DGLAAETAAL YLVTYVLTTL GAFGVVTLLS SPYSGADASQ LHHYRGLFWR
RPYLTAVLTV MMLSLAGIPF TAGFIGKFYI VAVGVEASRW WLVGGVVAGS AIGLYYYLRV
MVTLFLPEPG MQRRDATTDW AQRAGGVVVL GLAALVVVLG VYPAPMIDWV RFMVAG