Gene Csal_3115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_3115 
Symbol 
ID4028756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp3469903 
End bp3470799 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content71% 
IMG OID637968329 
Productphage integrase 
Protein accessionYP_575158 
Protein GI92115230 
COG category[L] Replication, recombination and repair 
COG ID[COG4973] Site-specific recombinase XerC 
TIGRFAM ID[TIGR02224] tyrosine recombinase XerC 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGCCG CGGTTGAACG CTTCCTGCAC AGCCTGTCGG GGCATGCCAG CCCCGCGACG 
CTGGATGCCT ACCGGCGCGA CCTGACCGCG CTGGCACGCT TTCTCGAGGC GAGCGGCATC
GATGACTGGG CGGCACTCGA CGTCGCCCAG GTGCGCCGCT TCATGGGCGC CGAACGCACA
CGCGGCCTGG CGCCGCGCAG CCTCGCCCGC CGCCGTGCCG CGCTCTCGCG TTTCGCCGAC
CACCTGGTGC GCAGCGGCAT CCTCGATCAC AACCCGGTGG CGCTGACCCA GACGCCCCGT
CAGCCCCGGC ATCTGCCACG CCCGGTGGAT GTCGATCAGC TCGCGCGCTT CCTGGATACC
CCGCACGACG GGACGCCGCT CGCCGTGCGC GATCAAGCCA TGCTGGAACT GTTCTATTCA
TGCGGGTTGC GTCTGGCGGA ACTCACGGCA CTGGACGTCA CCGACCTCGA TGCACGCCGC
CTGCGCGTGG TGGGCAAGGG CAACAAGCCT CGCCAGATGC CCATCGGCCG GCGCGCGCAG
GCGGCCCTGG CGGACTGGTA CCGGCTGCGC GGCCAGCTCG CCGGGCATGA CGAGCCCGCC
CTCTTCGTCG GCCAGCGTGG GGCGCGGCTG GGCCATCGTG CGGTACAGAA ACGCCTCGCT
CAGCTCGCCC GCGAGCGAGG GCTGGCCGAG CACCTGCACC CCCATCGCTT GCGCCACTCC
TTCGCCAGTC ACTTGCTCGA GTCGAGCCAG GACCTGCGTG CCGTGCAGGA ACTGCTGGGG
CACGCCAACC TCTCCACCAC CCAGGTCTAT ACCCGGCTCG ACTGGCAGCA TCTGGCCGAT
GCCTACGATC AGGCGCACCC CCGCGCCCGG CGTCGCGCGC CACCGGACGA CACCTGA
 
Protein sequence
MHAAVERFLH SLSGHASPAT LDAYRRDLTA LARFLEASGI DDWAALDVAQ VRRFMGAERT 
RGLAPRSLAR RRAALSRFAD HLVRSGILDH NPVALTQTPR QPRHLPRPVD VDQLARFLDT
PHDGTPLAVR DQAMLELFYS CGLRLAELTA LDVTDLDARR LRVVGKGNKP RQMPIGRRAQ
AALADWYRLR GQLAGHDEPA LFVGQRGARL GHRAVQKRLA QLARERGLAE HLHPHRLRHS
FASHLLESSQ DLRAVQELLG HANLSTTQVY TRLDWQHLAD AYDQAHPRAR RRAPPDDT