Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_3074 |
Symbol | |
ID | 4028878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | - |
Start bp | 3423270 |
End bp | 3425801 |
Gene Length | 2532 bp |
Protein Length | 843 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637968286 |
Product | translation initiation factor 2 |
Protein accession | YP_575117 |
Protein GI | 92115189 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGACA TGACCGTTAA GGATTTTGCC AGCAAGGTGG GACGCGATGT GTCCCGTCTG CTGGAGCAGA TGCAAGAAGC GGGTCTCCCC CACAAGACCG AAGGCGATGC GGTATCCGAG GAGGACAAGC AGCGTCTTCT CGAGCACCTG ACGCGTAGCC ACGGTGGGGA CAGCGGCGCG ACGAAGAACC GCGTAACGTT GACGCGTAAC ACCAAGAGTC GGATTCGCAG TGGCGATGGT CGCGGCAAGG CGATCGACGT GCAGGTTCGC AAGAAGCGTA CCTACGTCAA GCGCGAGCCG GAACCGGCCG AGGAAAAGGC GGCCGAGGAA ACCGGTCCGC GTCAGCTGGT CGGTGACATG GCCAGCGCCA ATCAGGCCAA GGCCGACGAG GCCGCCAAGG CGGAGCAAGC CGCTGCCGAG CAGGCTGCCA AGGCCAAGGC CGAAGAAGAA GCCGCTGCCG CCGCAGCATC GAAAGCGGCG GAAAGCGAGC CGGTTGCCGA GGCTCCCGGT GCGCCGCAGC CCGAGGAACC GGAAACCGCC AGCGAGCCTT TCGTCGAGGC GCCGCCCAAG GAGCCGCGCA CGCCGAATCG TCGTGGCCAG AACCATCAGA AGAAGGATAC CGGGCGCGGC CGCAAGCGTG ACGATGACGA AGAGCGTCGC GAACGCGGCG AACGGCGTCG TGGCAACGCC AAGAAGACCA AGCGCTCCGA GCGTCGCGGC AGCCGCCGTG GCGGCGGTCG CGACAATCAG CATGGCTTCC AGAAGCCGAC GCAGCCCATC GTGCGTGAAG TCGCCATCCC CGAGTCGATC AGTGTCGCCG ATCTGGCCGA CAAGATGTCG ATCAAGGCCA ACGAGGTCAT CAAGGCGATG TTCACCATGG GGGCGGCGGT GACCATCAAC CAGACCATCG ATCAGGACAC GGCGGCCATT GTCGTCGAAG AAATGGGCCA CAAGCCCAAG CTGGTCAAGG ACGATGCGCT GGAGACCGAG GTGCTCGAGG GCATCTCCTA CGAAGGCGAA GAGATTACCC GAGCGCCGGT CGTCACTGTC ATGGGGCACG TCGACCACGG CAAGACCTCG CTGCTCGACT ACATCCGTCG CACCAAGGTG GCGACCGGGG AAGCCGGCGG CATCACGCAG CACATCGGTG CCTATCACGT CGAGCACGAA AGCGGTGACA TCACCTTCCT CGATACCCCG GGTCACGCCG CATTCACGGC GATGCGTGCT CGCGGTGCGC AGGCGACCGA CGTGGTCATC CTGGTGGTCG CGGCCGATGA CGGTGTCATG CCGCAGACGG TCGAGGCGGT CGAACACGCC AAGGCGGCCG GTGTGCCGCT GGTCGTGGCC GTCAACAAGA TCGACAAGGA AGGCGCCGAT CCCGATCGCG TCAAGAACGA ATTGTCGCAA TACGGCGTGA TTTCCGAAGC CTGGGGCGGC GATACGCAGT TCGTGCATGT GTCGGCGAAG AGCGGTGAAG GCATCGACGC GCTGCTGGAA GCCATCCTGC TGGTGTCCGA AGTGCTCGAG CTCAAGGCCG TCCCGGAAGC GCCGGCCAAG GGCGTGGTCG TCGAGTCGCA GCTGGACAAG GGCCGTGGCC CGGTCGCGAC CGTGCTGGTG CAGAACGGCA CGCTTAAGCG GGGCGATATC GTCCTGGCGG GATTGCACTA TGGCCGCGTA CGCGCCCTGG TCAACGAACT CGGCAAGCGC GTGGAAGAGG TCGGCCCGGC CATGCCGGTG GAAATCCAGG GGCTCGATGG CACGCCCGAG GCCGGTGACG AGTTCATCGT CGTCGCCGAC GAGAAGAAGG CACGTGAAGT GGCCAACTTC CGTCAGGGCA AGTACCGCGA GGTGCGCCTG GCACGCCAGC AGAAGGCCAA GCTGGAGAAC ATGTTCAGCC AGATGGGCCA GGACGAAGTC GCCAAGGTCA ACATCGTGCT CAAGGCCGAT GTGCAGGGCT CCCTGGAAGC CATTCGTGGC GCGCTGGAAG AGCTCTCCAC CGATGAAGTC AAGGTGGCGG TCGTCTCGTC CGGTGTGGGC GGCATTACCG GCACCGACGC CAACCTGGCC GTGGCCAGTG AGGCGATCTT GGTCGGCTTC AACGTGCGTG CCGACGTGTC CGCGCGGGAG ATCGTCGAAC GTGAAGGCCT GGACCTGCGC TATTACAGCG TGATCTACCA GCTCATCGAC GAGGTCAAGC AGGCCATGAG CGGCATGCTG GCGCCGGAGT GGAAGGAAGA GATCGTCGGT GTGGCCGAAG TGCGCGACGT GTTCAAGGCG CCCAAGATCG GTGCCGTGGC AGGCTGCATG GTCGTCGAGG GTACCGTCTA TCGTCACAAG CGTATTCGTG TGCTGCGCGA GAACGTGGTC ATCTACGAAG GCGAGCTCGA GTCCCTGCGT CGTTACAAGG ACGACATTGG CGAGGTCCGC AGCGGTATGG AGTGCGGTAT CGGCGTCAAG AACTACAACG ACGTTCAGGT CGGCGACAAG ATCGAGGTCT TCGATCAGGT CAAGGTCGAG CGTAGCCTGT AA
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Protein sequence | MSDMTVKDFA SKVGRDVSRL LEQMQEAGLP HKTEGDAVSE EDKQRLLEHL TRSHGGDSGA TKNRVTLTRN TKSRIRSGDG RGKAIDVQVR KKRTYVKREP EPAEEKAAEE TGPRQLVGDM ASANQAKADE AAKAEQAAAE QAAKAKAEEE AAAAAASKAA ESEPVAEAPG APQPEEPETA SEPFVEAPPK EPRTPNRRGQ NHQKKDTGRG RKRDDDEERR ERGERRRGNA KKTKRSERRG SRRGGGRDNQ HGFQKPTQPI VREVAIPESI SVADLADKMS IKANEVIKAM FTMGAAVTIN QTIDQDTAAI VVEEMGHKPK LVKDDALETE VLEGISYEGE EITRAPVVTV MGHVDHGKTS LLDYIRRTKV ATGEAGGITQ HIGAYHVEHE SGDITFLDTP GHAAFTAMRA RGAQATDVVI LVVAADDGVM PQTVEAVEHA KAAGVPLVVA VNKIDKEGAD PDRVKNELSQ YGVISEAWGG DTQFVHVSAK SGEGIDALLE AILLVSEVLE LKAVPEAPAK GVVVESQLDK GRGPVATVLV QNGTLKRGDI VLAGLHYGRV RALVNELGKR VEEVGPAMPV EIQGLDGTPE AGDEFIVVAD EKKAREVANF RQGKYREVRL ARQQKAKLEN MFSQMGQDEV AKVNIVLKAD VQGSLEAIRG ALEELSTDEV KVAVVSSGVG GITGTDANLA VASEAILVGF NVRADVSARE IVEREGLDLR YYSVIYQLID EVKQAMSGML APEWKEEIVG VAEVRDVFKA PKIGAVAGCM VVEGTVYRHK RIRVLRENVV IYEGELESLR RYKDDIGEVR SGMECGIGVK NYNDVQVGDK IEVFDQVKVE RSL
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