Gene Csal_3020 details

Gene Information

• Locus tag: Csal_3020
• ID: 4028986
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chromohalobacter salexigens DSM 3043
• Kingdom: Bacteria
• Replicon accession: NC_007963
• Strand: -
• Start bp: 3361310
• End bp: 3363199
• Gene Length: 1890 bp
• Protein Length: 629 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637968226
• Product: phospholipid/glycerol acyltransferase
• Protein accession: YP_575063
• Protein GI: 92115135
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase
• TIGRFAM ID: [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.011576
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATCCCGC AACTGCTTAC CCAACGGCGT TTCGCTCCCT TCTTCTGGAC CCAGGCTCTG 
GGCGCGTTCA ACGACAATGT CTTCAAGAAC GTGCTGCTGC TGCTGCTCAC CTTCGTGGCC 
GTGCCGCGTT ACGGCTGGGA CACGGGGCTG CTCAACAACC TTGCCGCAGG CCTTTTCATT 
CTGCCCTTCC TGCTGTTTTC CGCATGGGGC GGCCTGCTGG CCGATCGTCT CGACAAGCAG 
CGCCTGATTC GTCGCCTCAA GCTGCTCGAG CTCGTCACCA TGTGCGTGGC GGCTGCCGCC 
GTGTGGTACG AGGCCTATCT CCTGCTGCTG GCGCTGCTGT TCATGATGGG TACCCAGTCG 
GCGCTCTTCG GCCCGGTCAA GTACGCCATC CTGCCGCAGC ATCTGTCGGC GACCGAGCTG 
GTCAAGGGCA ATGCCTGGGT CAGTCTGGGC ACCTTCCTGT CGATATTGCT GGGAACGCTG 
CTGGCCGGCC TGCTGGCCGC CCTGGACGGC GCCTGGGCGC GTGGCGCGAT CGCCGTCACC 
CTGGTGTCGC TGGCGTTGCT CGGCTGCCTT GCCAGCCTGT GGGTGCCCAG TGCCCCCTCC 
AGTCAGGAAG GAGCGGTCCA GTGGCGACCC TGGCGCGGAG CGTGCGAGGT CATGCGCGAT 
GCCTGGCGCG AGCCGCGAGT GTTTCGTGCC TTGCTGGGCA TCAGCCTGTT CTGGTTCCTG 
GGGGCCTGTT ACCTGACGCA GCTGCCGGCC TGGACGCGGG ATGTCGTGCA CGGCAACGAG 
GCCGTCGTCA GCGCCTTGCT GGCGGCATTC GCGCTCGGGG TGGGGGCCGG TGCGCTGCTG 
TGTGCGCGCC TGTCGGCCGG GCGACTGGAA GTCGGTCTGG TACCGGCGGG GGCCATGATC 
TTTGGTCTGG CCGGGCTGGA CCTGGGGCTG ACTCAGCCGC TGGCGGGCAA CGACTCGGGC 
CTGGCGGCCT TGAGCCTGGT GCCGGCATTC TGGCATCAGA TGCTCGATCT CGCGGCGATC 
GGCCTGGGTG GAGGCCTCTA CATCGTCCCG CTGTACACGC TGATCCAGTT GGAAAGTCGC 
GATGACCATC GTGCTCGCAT GATCGCCGCC AACAATATCC TCAATGCCTT GTTCATGGTG 
CTGGCGGCGG CCTTCGGGGT GGTGATGCTG ACCCTGGTCG GTGCATCGCT CAACGCCTTC 
ATGCTGGCGC TTTCGGCGAT TTCGCTGACC CTGGCGGCGG CGATCTTGTG CTGTGTGCCA 
CGTCCCGTGC TGCGTCTGTC GATCTTCGTG CTGATCCGTG TGCTCTACCG GCTGCGCTTT 
CGCGGGCGCC AGGCCGTCCC CGCTCGAGGT GCGGCACTCG TGGTGTGCAA CCATGTCAGC 
TTCATGGACG CCTTGATCCT GGGCGGCGGT TGTCCGCGTC CGCTGCGGTT CTTGATGGAT 
CGCCCGATCT ACGAGTCCCG CTGGCTCAAC TGGTTCTTCC GCATCGCCGG TGCGATTCCG 
GTGGATTCGG AGCGCTGCGA CCCGGGCGGC GTGCGCCGGG CCCTGGATGA GGTGAGCCAT 
GCCCTGCGCC AGGGCGAGGT CGTCATGCTG TTTCCGGAAG GGCGGCTGAC GCCCGATGGC 
AAGGTGCATC GGTTCCGGCG CGGCATCGAC ATCATCCTGG CCCGCGACCC GGTCCCCGTG 
GTGCCTGCCG GTCTGGCCGG CCTGTGGGGG TCATGGACCT CGAACCGTGG CGGCAAGGCG 
CTGACCAAGT GGCCGCGCCG TTTCCGGGCC CGCGTGGCGC TGTACTTCGG CGACCCCATT 
CCTGCCGGTC AGGCGACCCG CGCCGAAATG GAGCGCCGTG TCGCGACGCT CAAGGCCAAA 
GCGGAAGCCG AGATCGGGGT GGAGTCTTAG 

 

Protein sequence

MIPQLLTQRR FAPFFWTQAL GAFNDNVFKN VLLLLLTFVA VPRYGWDTGL LNNLAAGLFI 
LPFLLFSAWG GLLADRLDKQ RLIRRLKLLE LVTMCVAAAA VWYEAYLLLL ALLFMMGTQS 
ALFGPVKYAI LPQHLSATEL VKGNAWVSLG TFLSILLGTL LAGLLAALDG AWARGAIAVT 
LVSLALLGCL ASLWVPSAPS SQEGAVQWRP WRGACEVMRD AWREPRVFRA LLGISLFWFL 
GACYLTQLPA WTRDVVHGNE AVVSALLAAF ALGVGAGALL CARLSAGRLE VGLVPAGAMI 
FGLAGLDLGL TQPLAGNDSG LAALSLVPAF WHQMLDLAAI GLGGGLYIVP LYTLIQLESR 
DDHRARMIAA NNILNALFMV LAAAFGVVML TLVGASLNAF MLALSAISLT LAAAILCCVP 
RPVLRLSIFV LIRVLYRLRF RGRQAVPARG AALVVCNHVS FMDALILGGG CPRPLRFLMD 
RPIYESRWLN WFFRIAGAIP VDSERCDPGG VRRALDEVSH ALRQGEVVML FPEGRLTPDG 
KVHRFRRGID IILARDPVPV VPAGLAGLWG SWTSNRGGKA LTKWPRRFRA RVALYFGDPI 
PAGQATRAEM ERRVATLKAK AEAEIGVES