Gene Csal_3009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_3009 
Symbol 
ID4028975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp3350605 
End bp3351993 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content65% 
IMG OID637968215 
Productthreonine synthase 
Protein accessionYP_575052 
Protein GI92115124 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0498] Threonine synthase 
TIGRFAM ID[TIGR00260] threonine synthase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.923826 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTATA TCAGTACGCG CGGCGAGGCG CCGGCGCTGA GTTTCGAGGA TGTCGTGCTG 
ACCGGCATGG CCGCCGACGG TGGTCTGTAC GTGCCGGAAA CGATCCCCAC CTTCTCGCAG
GCGGAGCTCG AGGCGATGGC CGGGCTGTCA TATGCCGAGA TCGCGTTTCG GGTGATGAAG
CCGTTCGTGG GCGGGGAGAT CGATGACGCG ACCTTCCGGC ACCTGGTGGA AGACGCCTAC
GCGACCTTCA GCCACGAAGC GGTGGTGCCC CTCAACCAGC TGTCGAGCAA TCATTTCCTG
CTCGAGCTGT TCCATGGCCC GACCCTGGCG TTCAAGGACG TCGCCCTGCA GCTGCTGGGA
CGCATCCTCG ATCACTTCCT GGCCAAGCGT GGCGAGCGCG CGGTGATCAT GGGCGCCACG
TCCGGGGATA CCGGCTCGGC GGCGATCGAA GGCTGCCGGC ATTGCGACAA TCTGGACATC
TTCATCCTGC ATCCGCACAA CCGGGTGTCC GAGGTCCAGC GCCGGCAGAT GACCACCGTG
CTTGCCGACA ACGTCTTCAA CATCGCCATC GAGGGCAACT TCGATGACGC CCAGGCGATG
GTCAAGGCGA GCTTCGCCGA CCAGCGTTTC TTGAAGGGCA CGCGCCTGGT GGCGGTGAAC
TCCATCAACT GGGCGCGCAT CATGGCGCAG GTGGTCTACT ACGTGGCTTC TGCCGTGGCG
TTGGGCGCGC CGCGCCGCGA GGTGAGCTTC TGCGTGCCGT CCGCCAACTT CGGCAATGTC
TTCGCCGGCT ACGTGGCATC GCGCATGGGG TTGCCGGTCA AGCAATTCAT CGTCGCCACC
AACGCCAACG ACATCCTGCA TCGCACCCTG GCCGCCAACG ACTTCTCCAA GCAGGCGCTC
AAGGCGACGC TGGCGCCGTC GATGGATATC GTCGTGTCGT CGAATTTCGA GCGCTTGCTG
TTCGAGGCCT ATGATCGCGA CGGCGCGGCG GTGCGTGACC TGCTCGAGCG ATTCCAGCAC
GAACCCACGG TGCTTGCCGA GGCGCCCCTG GCGCGACTGC GCGAGCAGTT CTCCAGCTTC
AGCGTCGACG ACGCGACCAT CCTCGAGGTG ATTCGCGAGG CGCATGCCCG CACCAAGGAA
CTGCTCGATC CGCACACTGC CACCGGGTAT CGCGCGGCCG AGCGCGTGCG TGCCGACGAG
GTCACCCCGA TGATCACCCT GGCGACCGCG CATCCGGCCA AGTTCGCCGA TGCCGTGATC
AAGGCGGGCA TCGACGAAGT GCCGTTGCCG TCTCACATGG ATGGCTTGCT GGAGCGCGAG
GAGCGCTATC AGGTACTGCC TGCCGACCTG GAAGCCGTGC AGGCCTTCGT CGCCGAACAG
CGCCGCTGA
 
Protein sequence
MRYISTRGEA PALSFEDVVL TGMAADGGLY VPETIPTFSQ AELEAMAGLS YAEIAFRVMK 
PFVGGEIDDA TFRHLVEDAY ATFSHEAVVP LNQLSSNHFL LELFHGPTLA FKDVALQLLG
RILDHFLAKR GERAVIMGAT SGDTGSAAIE GCRHCDNLDI FILHPHNRVS EVQRRQMTTV
LADNVFNIAI EGNFDDAQAM VKASFADQRF LKGTRLVAVN SINWARIMAQ VVYYVASAVA
LGAPRREVSF CVPSANFGNV FAGYVASRMG LPVKQFIVAT NANDILHRTL AANDFSKQAL
KATLAPSMDI VVSSNFERLL FEAYDRDGAA VRDLLERFQH EPTVLAEAPL ARLREQFSSF
SVDDATILEV IREAHARTKE LLDPHTATGY RAAERVRADE VTPMITLATA HPAKFADAVI
KAGIDEVPLP SHMDGLLERE ERYQVLPADL EAVQAFVAEQ RR