Gene Csal_3002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_3002 
Symbol 
ID4028968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp3340545 
End bp3342140 
Gene Length1596 bp 
Protein Length531 aa 
Translation table11 
GC content66% 
IMG OID637968208 
ProductABC transporter related 
Protein accessionYP_575045 
Protein GI92115117 
COG category[R] General function prediction only 
COG ID[COG4172] ABC-type uncharacterized transport system, duplicated ATPase component 
TIGRFAM ID[TIGR02323] phosphonate C-P lyase system protein PhnK 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGACA CGTTACTCGA AATCGACAAC CTGACGGTCG ACTTCCAACT GCCCACCGGC 
ACGGTCTCGG CGGTCAAGCA CGTGAGCTTC TCGCTCCAGC CCGGCGAGAC GCTGGCGCTG
GTCGGCGAAT CGGGCTCCGG CAAGTCGGTG TCCTCGACCG CCGCGATGCG GCTGCTGCCG
GAACTGGCCC GGACATCCGG CGCCATCCGC TTCAAGGGCG AGGACCTCTT GCGCGCCACG
CCCAGGCGCA TGCGCCACAT TCGCGGCAAT GCCATCTCGA TGATCTTCCA GGAGCCGATG
ACCTCGCTCA ATCCGCTGCA TCGCATCGGT CGCCAGATCG CCGAGGTGCT GGAAAAGCAC
CGCGGGCTTA AGGGTAGGCA GGCCCGCACC AAGATCGTCG AGCTGCTCGA ACAGGTAGGC
ATACCCGACC CCGCTCGGCG CATCGACAGC TATCCCCACG AGCTCTCCGG CGGCCAGCGT
CAGCGCGTCA TGATCGCCAT GGCGCTGGCC TGCGAGCCGG AACTGCTGAT CGCCGACGAA
CCCACCACCG CCCTCGACGT CACGGTCCAG GCGCAGATCC TGGCGCTTCT CAAGGACCTG
CAGGCGCGCT ACGGCATGGC GATTCTGTTC ATCACCCACG ATCTGGGTAT CGTCCGCCAT
TTCGCCGACC GGGTATGCGT GATGCGCCGC GGAGAACTGA TCGAGAGCGG CCCCACCGCC
GAGCTATTCG ACACACCGCG CGACGACTAC ACACGTATGC TGATCGACGC CGACCCACGT
GGACGCAAGA CGCCGGTGGA TCCGTCGATG CCGGTATTGT TCGAGGCGAA GGACCTGCAG
GTACGCTTCA CGTTGAAGAA ACGCCTGTTC CGCGCAAGCG AGCATTTCGA GGCGGTACGC
GGCATCGACC TGACCATCCG CCGCGGCCAG ACCGTGGGCA TCGTCGGCGA GTCCGGCTCG
GGCAAGTCGA CGCTCGGCCG GGCGCTGCTG CGCCTGCTCG ACAGCCGTGG CGAGATTCGT
TTCGACGGGC AGGACATCGC TGCACTGGAT ACCGCCGGCA TGCGTCCGCT GCGCTCGCGC
CTCCAGGTGG TCTTTCAGGA TCCCTTCGGC TCGCTGTCGC CACGCATGAC CGTCGGCGAG
GTCATCAGCG AAGGGTTGCG CGTCCACCAC CCGACGCTCG ACCGACGCCA GCGCGAGGCC
CGGGTCATCG AAGCGCTGGA AGACGTCGCA CTGGACCCGG CGATGCGCAA TCGCTACCCC
CACGAGTTTT CCGGCGGCCA ACGCCAGCGT ATCGCCATCG CCCGGGCGCT GGTGCTCAAG
CCGGAATTCC TGCTGCTCGA CGAGCCCACC TCGGCGCTGG ACCGTTCGGT GCAGGTCACG
GTGATCGACC TGCTGCGCGA TCTGCAGCAG AAACACGGCC TGACCTACCT GTTCATCAGT
CACGACCTAT CGGTGGTGCG CGCGCTGGCC GATACCGTGC TGGTGATGAA AGCGGGGCAA
GTCGTTGAGC AGGGCGCAAC CGAAGAAATC TTCGCCAACC CGCGCGAGCA CTACACCCGG
GAGCTGATGC GGGCCGCCTT CGTCGATGCG GCCTGA
 
Protein sequence
MSDTLLEIDN LTVDFQLPTG TVSAVKHVSF SLQPGETLAL VGESGSGKSV SSTAAMRLLP 
ELARTSGAIR FKGEDLLRAT PRRMRHIRGN AISMIFQEPM TSLNPLHRIG RQIAEVLEKH
RGLKGRQART KIVELLEQVG IPDPARRIDS YPHELSGGQR QRVMIAMALA CEPELLIADE
PTTALDVTVQ AQILALLKDL QARYGMAILF ITHDLGIVRH FADRVCVMRR GELIESGPTA
ELFDTPRDDY TRMLIDADPR GRKTPVDPSM PVLFEAKDLQ VRFTLKKRLF RASEHFEAVR
GIDLTIRRGQ TVGIVGESGS GKSTLGRALL RLLDSRGEIR FDGQDIAALD TAGMRPLRSR
LQVVFQDPFG SLSPRMTVGE VISEGLRVHH PTLDRRQREA RVIEALEDVA LDPAMRNRYP
HEFSGGQRQR IAIARALVLK PEFLLLDEPT SALDRSVQVT VIDLLRDLQQ KHGLTYLFIS
HDLSVVRALA DTVLVMKAGQ VVEQGATEEI FANPREHYTR ELMRAAFVDA A