| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_2999 |
|---|
| Symbol | |
|---|
| ID | 4028965 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | + |
|---|
| Start bp | 3336863 |
|---|
| End bp | 3338512 |
|---|
| Gene Length | 1650 bp |
|---|
| Protein Length | 549 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637968205 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_575042 |
|---|
| Protein GI | 92115114 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.305947 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCCAC TCGCGGCATC CGACACAACA ACAAGCGGAA CAGACGACAT GCTTCGACAC
TCGCACACTC GGCTTGCCAC GACACTGCTA TCCTCCCTGT CGCTGGCGTC ACTGGCCCTG
GCGGCGCCGG CCCAGGCCGA CACGCTGAAC ATCGGCGTCA TGGGGGAGCT GGCCTCGTTC
GATACCTCGC AGGTTTCCGG CGGTGTCTGG GAATCGCAGA TCCTCATGGA CGTCTACGAA
GGCCTGCTCA AGGAAAACCC CGAGGGCGAG GTGATGCCCG GCATGGCCAC CGACTGGGAC
ATCTCCGAGG ACGGCAGGAC CTATACCTTT CATCTGCGCG AAGGCGCCAA ATGGTCCGAC
GGCGCGCCGG TCACCGCCGA AGACTTCGTG TTCGGCTGGC AGCATCTGCT CGACCCGGCC
AGCGCTTCGA AATACGCCTA CCTGCTCTAT CCGATAAAGA ATGCCGAAGC CGTCAACACG
GGCGACAGGC CGCTCGACGC ACTCGGCGTC GAATCGCTGG ACGATGGCAA GACGCTCAAG
GTGACACTCG ATGCCCCCAC GCCCTACTTC CTGCAGCTGC TGACCCACTA CACGGCCTAC
CCGGTCCCCA AGCACGCCGT CGAGAAATAC GGCAAGCAGT GGGTCAAGAT GGACAACATC
GTCACCAACG GCGCCTTCAC GCCCGTCGAG TGGGTCTCGC AATCGCGCAT CAGCGTCGAG
AAGAATCCCG ACTACTACGA GGCCGACGAG GTCGAACTCG ACGGCGTCAA CTACTTCAAC
ACCGAGGATC GCAATGCCGC CATCTCGCGC TTCCGCGCCG GCGAGCTGGA CATCGTCCGC
GATTACCCCT CGAGCCGTTA CCAGTGGCTC GAGGACAACC TCCCCGAGGC CACCCACCTG
AGCCCGATGC TGGGGTCCTA CTACTACGTG CTCAATACCC GCGAGGGGCG CCCGACCGCC
GACAAGCGGG TCCGCGAGGC CCTGAACCTG GTCGCGCGCC GCAAGGTACT TTCCGAGCAG
ATCATGGCCG GCAGTTTCAA GGATGCCTAC TCGCTGGTCC CGCCGGGCAC CAGCCATTAC
GACGTCCAGC GCATGGACGG TGTCGATGGC GACTACCAGA AGCGCCTGGC CAGGGCCAAG
CAACTGATCG AGGAGGCCGG CTACGGCCCC GACAACCCGC TGCACCTGCA ACTGCGCTAC
AACACGTCCG ATGAGCACAA GAAGATCGCC ATCGCCCTGG CCGCGATGTG GAAGCCGCTG
GGTGTCGACG TCGAGATGAC CAATGCCGAG GCCACCGTGC ACTACCAGAC CATCCAGCAA
GGCGACTTCG ATATCGCCCG TGCCGGCTGG ATCGCCGACT ACAACGATGC CGAGAACTTC
CTGACCTTGC TGCGCAGCGG CGTCGGCAAC AACTACGGCG GCTACGCCAA TCCCGAGTAC
GACGCGCTGC TCGCTCAAGC CGCCACCGTT CGGGACCTCG ACGAGCGCGA GGCACTGCTC
GAAAAAGCCG AGAACGTCGC CCTCGACGAC TACGCCCTCG TGCCGCTGCT CTATTACGTC
ACTCGCAATC TGGTCAATCC CGATATCAGC GGCTGGCAGG ACAACGCCGA GGACGACCAT
CCATCGCGCT GGGTGACGTT CACCGAGTAA
|
|---|
| Protein sequence | MSPLAASDTT TSGTDDMLRH SHTRLATTLL SSLSLASLAL AAPAQADTLN IGVMGELASF
DTSQVSGGVW ESQILMDVYE GLLKENPEGE VMPGMATDWD ISEDGRTYTF HLREGAKWSD
GAPVTAEDFV FGWQHLLDPA SASKYAYLLY PIKNAEAVNT GDRPLDALGV ESLDDGKTLK
VTLDAPTPYF LQLLTHYTAY PVPKHAVEKY GKQWVKMDNI VTNGAFTPVE WVSQSRISVE
KNPDYYEADE VELDGVNYFN TEDRNAAISR FRAGELDIVR DYPSSRYQWL EDNLPEATHL
SPMLGSYYYV LNTREGRPTA DKRVREALNL VARRKVLSEQ IMAGSFKDAY SLVPPGTSHY
DVQRMDGVDG DYQKRLARAK QLIEEAGYGP DNPLHLQLRY NTSDEHKKIA IALAAMWKPL
GVDVEMTNAE ATVHYQTIQQ GDFDIARAGW IADYNDAENF LTLLRSGVGN NYGGYANPEY
DALLAQAATV RDLDEREALL EKAENVALDD YALVPLLYYV TRNLVNPDIS GWQDNAEDDH
PSRWVTFTE
|
|---|
| |