| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_2978 |
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| Symbol | |
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| ID | 4027516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | + |
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| Start bp | 3315950 |
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| End bp | 3317230 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637968185 |
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| Product | TRAP dicarboxylate transporter- DctM subunit |
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| Protein accession | YP_575022 |
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| Protein GI | 92115094 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.735249 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGTCT TCATTCTCTT CAGCGTATTC ATCGTGCTGC TGCTGATCGG CATCCCCATC
GCCTTTTCCC TGGGCATCGC CTCGCTCTCC TATCTCCTGC TCGCGGACAT CTCGCTGACC
ATCATCCCGC AGCGAATGTA CGGCGGCATC GACACGTTCG TGCTGCTGTG CATCCCCGGC
TTCGTGCTGG CCGGCAACCT GATGAACGTC GGCAACATCA CCGACCATAT CGTGCGTTTC
TCGAACGCGC TGGTGGGGCA CATCCGTGGC GGCCTGGGGC TGGCCAACGT GGGGGGCTCG
ATGATCTTCG GCGGGATCTC CGGCACCGCC GTGGCCGACG CGGCGAGCAT CGGCTCGGTG
ATGATCCCCG GCATGTCCCG CGCCGGGTAC GACAAGCCCT TCGCCGCCGC GGTGACCGCC
GCCTCCTCGA CGGTGGGCCC GATCATCCCG CCCAGCGTGC CGATGATCAT CGCCGGCTCG
CTGTCCGGCG TCTCGGTGGG ACGCATGTTC CTGGCCGGCG CCATCCCCGG CCTGCTGCTG
GGCCTGGCGA TGATGATCAC CGTGTACATC CTGGCGGTGA AACGCGGGTA CCCGCGCGAG
AAACGCTCCA CGTTCCGGCA ACTGGTGCTG GAAGGACGCA GTGCCTTCTG GGCATTGCTG
ATGACCTTCA TCATTCTCTA CGGGATCGTC GGCGGCGTTT TCACCCCCAC CGAAGCCTCG
ATCGTCGCCA GCCTGTATGC CCTGGTGATC GGCATGTTCG TCTACAAGGG CATCACCTGG
CGCAATCTGC CGCAGATCGT CATCGACACC GTCCTGACCT CGGGGTCGCT GATGATCCTG
GTCGGCCTGG CCAATCTGTT CGGCTGGATC CTCACCAGCC AGCAGATTCC GCAGATGATC
GCCGACCAGA TCCTGGCCAT CAGCGACAAC CCGCTGGTCG TGATCCTGAT CCTCAATCTG
ATCCTGCTGG TGGTGGGTAC CTTCATGGAA ACCATCGCTG CCCTGATCAT CCTGTTCCCG
GCGCTGCTGG GCGTCGCCAC CGGGGTCGGC ATGGATCCCG TGCACTTCGG CCTGATGGCG
GTGCTCAACC TGATGATCGG ACTGACCACA CCGCCGCTCG GGGTCTGCCT GTTCGTGGTC
GCCGGCATCG GCAAGCTGCC CATGCTGCGC GTGGCCCGTG CCATCGTGCC GTTTCTGATC
TGCAATCTCG TGGTGCTGCT GCTGGTCGCA TACATCCCCG CCCTGTCACT CTGGCTACCC
AACCTGCTGC TCGGGGAGTG A
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| Protein sequence | MEVFILFSVF IVLLLIGIPI AFSLGIASLS YLLLADISLT IIPQRMYGGI DTFVLLCIPG
FVLAGNLMNV GNITDHIVRF SNALVGHIRG GLGLANVGGS MIFGGISGTA VADAASIGSV
MIPGMSRAGY DKPFAAAVTA ASSTVGPIIP PSVPMIIAGS LSGVSVGRMF LAGAIPGLLL
GLAMMITVYI LAVKRGYPRE KRSTFRQLVL EGRSAFWALL MTFIILYGIV GGVFTPTEAS
IVASLYALVI GMFVYKGITW RNLPQIVIDT VLTSGSLMIL VGLANLFGWI LTSQQIPQMI
ADQILAISDN PLVVILILNL ILLVVGTFME TIAALIILFP ALLGVATGVG MDPVHFGLMA
VLNLMIGLTT PPLGVCLFVV AGIGKLPMLR VARAIVPFLI CNLVVLLLVA YIPALSLWLP
NLLLGE
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