Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_2945 |
Symbol | |
ID | 4028340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 3282990 |
End bp | 3284054 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637968152 |
Product | ABC transporter related |
Protein accession | YP_574989 |
Protein GI | 92115061 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1125] ABC-type proline/glycine betaine transport systems, ATPase components |
TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00675888 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGAAC TTCAGGGACT GACCAAGCGC TATGGGGGCT CGCGGGTCGT CGACGACATT TCCCTTACCG TCGAGCAGGG AGAGTTCTGC GTGCTCATCG GCCCCTCGGG ATGCGGCAAA TCGACCACGC TGAAGATGAT CAACCGCCTG ATCACGCATA GCGAGGGGCG GATCCTGGTA GGCGGCGAGG ATGTCACTAC CCTGCCGCCG GAGCTTCTGC GTCGCCGGAT CGGTTACGCC ATCCAGTCGA CCGGACTGTT TCCCCATTGG CGCGTCGCCG AGAACATCGC GACCGTGCCC AGGTTGCTGA AGTGGTCCAC GTCACGGATC AACGCCCGTG TCGATGAATT GCTGGCGCTG TTTCAGCTCG ACGCCGACGA TCTGCGCGAC AAGTATCCCC ACCAGCTCTC GGGCGGGCAG GCACAACGCG TCGGCGTGGC CCGTGCGCTG GCCGCCGACC CCGATGTGCT GCTGATGGAC GAGCCCTTCG GCGCCGTCGA CCCATTGACG CGCGACGCCT TGCAGGTCGA GCTGGCCCGC GTGCATCGCC AGACCGGCAA GACCATCGTC TTCGTCACCC ACGACATGGA CGAGGCCCTG CGCCTGGCTT CCCGCGTGGC CCTGCTCAAT GGCGGCCGGC TCGTGCAATA CGATCGCCCA GCGGAACTCC TCGTCGACCC TGCCAACGAT TTCGTCCGCG ACTTCATCGG TCGCGCCGAC CTGGGGCTCA AGCTGCTCTC GCGGCGCCGG GTCGAGCAGT ACTGTCAGCC CGTCCAGGGC ACGCGCGAAG CCACGATCAC GCAAGCGGCC ACCACCCACG CGCGCCCCAC CTGGCAGGTG GATGCCGACA ATCGGCCCCT GGCACTCATC GGCGGGCGGC TGGAAGAGCC CGCGACCGTA CGCACCGACG TCAACGGCGA ATGGACGGCC ACGCCGGACA TGTCCATGAA GGAAGCGCTG TCGCGCATGG TATGGTTTCG CGTCACGGCC CTGCCGGTGC TCGACGACCA GGGACGCTTG CTGGGCGAGG TGACGATGGC CGGCGTCATG GGGCATCGCC CATGA
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Protein sequence | MIELQGLTKR YGGSRVVDDI SLTVEQGEFC VLIGPSGCGK STTLKMINRL ITHSEGRILV GGEDVTTLPP ELLRRRIGYA IQSTGLFPHW RVAENIATVP RLLKWSTSRI NARVDELLAL FQLDADDLRD KYPHQLSGGQ AQRVGVARAL AADPDVLLMD EPFGAVDPLT RDALQVELAR VHRQTGKTIV FVTHDMDEAL RLASRVALLN GGRLVQYDRP AELLVDPAND FVRDFIGRAD LGLKLLSRRR VEQYCQPVQG TREATITQAA TTHARPTWQV DADNRPLALI GGRLEEPATV RTDVNGEWTA TPDMSMKEAL SRMVWFRVTA LPVLDDQGRL LGEVTMAGVM GHRP
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