Gene Csal_2894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2894 
Symbol 
ID4027902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp3226260 
End bp3227045 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content69% 
IMG OID637968102 
ProducttRNA pseudouridine synthase C 
Protein accessionYP_574939 
Protein GI92115011 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0564] Pseudouridylate synthases, 23S RNA-specific 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTTGG AATTGCCCGT ACTTTATCAG GACGAGCGCA TGGTTGCCGT GCAAAAACCG 
TCGGGAATGC TCGTTCACCG CAGTCCGATC GCCCGTGACG CGCGGGTGTT CGCCCTGCAG
ACCCTGCGCA ACCAACTGGG GCGCCACGTC TATCCGGTCC ACCGGCTCGA CCGGCCGACC
TCGGGGCTTC TGCTGTTCGC CCTCGACCCG GAGATGGCCC AGGCGCTGGG CGAGGAATTC
ACCGCGCACC GCGTGCACAA GCGCTACCTG GCGGTGGTCC GCGGCGTCGG CCCGGAGCAG
GACCTGCTCG ATTACGGCCT GCGCGAGGAA GATGGCTCGC GGCCCAAGGC GGAAATGCCC
GAACTCGAAG CCTGGACGGC CGTGCGCCGC CTGGACAGCG TCGAACTGCC GGTGCGCATC
GACCGTTATC CCCAGGTACG CTATTCCTTG ATGGAGGCCC GGCCATGGAC CGGGCGGCGG
CATCAGATTC GCCGCCACCT GGCGCGGCGT GGCTATCCGA TCATCGGCGA CGCCAAGCAT
GGCAAGGGCG CCCACAATCG CTTCTTCCGC GAGCGACTGG ACAGCCCGCG CCTGCTGCTC
GCGGCCGTGG GCATGACGGT CTGGCACCCC GAGCAGGCAC GCACGCTGCA GCTCGATGCG
CCCCTGGCCG ACGACATGCA GGCGCTGTTC GCGCGCTTCG GCTGGCAGGG CCACGCCCCG
GCGGCCCGCG TCGCCTGGCA CGCAGAACGC CCCGCCGCGT TGTTGTCACC CGGCCACGAC
CGGTAA
 
Protein sequence
MSLELPVLYQ DERMVAVQKP SGMLVHRSPI ARDARVFALQ TLRNQLGRHV YPVHRLDRPT 
SGLLLFALDP EMAQALGEEF TAHRVHKRYL AVVRGVGPEQ DLLDYGLREE DGSRPKAEMP
ELEAWTAVRR LDSVELPVRI DRYPQVRYSL MEARPWTGRR HQIRRHLARR GYPIIGDAKH
GKGAHNRFFR ERLDSPRLLL AAVGMTVWHP EQARTLQLDA PLADDMQALF ARFGWQGHAP
AARVAWHAER PAALLSPGHD R