| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_2887 |
|---|
| Symbol | |
|---|
| ID | 4027895 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | - |
|---|
| Start bp | 3218183 |
|---|
| End bp | 3219772 |
|---|
| Gene Length | 1590 bp |
|---|
| Protein Length | 529 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637968095 |
|---|
| Product | BCCT transporter |
|---|
| Protein accession | YP_574932 |
|---|
| Protein GI | 92115004 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1292] Choline-glycine betaine transporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGCGCCT CACGCGACGA TCGGAACTGG ACATTGACGA CTCAAAACGA GGCGAGCGCC
ACGCGCTCGG GCACGCATTT TGGCGACCCG ACGGTGATGG GGCTGTCGAT CGGCTTCATC
ATCCTTTTTG TGGCGTTTTC GTTGATCGAC GCCGACGCAA TGACCGCGGC GATCAGCGTG
GGGTTCGCCT GGACGGCGAA GAATCTGGGG GCCTATTTCC AACTGCTGCT GCTGTTGAAC
TTGTTCATCG CCGTGGGCGT GGCGGTATCG CCTGCGGGGC GCGCGCGCAT CGGCGATCGG
CAACGCCCGG ACATGGGCAC CTTCAAGTGG GTGTCGATCA TCTTGTGCAC GCTGCTGGGC
GGAGGCGGTG TCTTCTTTGC TGCCGGCGAA CCTATCTACC ATTTCGTGGT CACGCCGCCG
GCATTTTCCA GTGAGCCAGG TACGCCGGCA GCCGTGCCCA ATGCGCTGGC ACAGTCCTTC
ATGCACTGGG GGTTTCATGC CTGGGCGGTG CTCGGCACCC TGGCGGCCAT CGTGCTGTCG
CATCATCACT ATGATCGCGG TTTGCCGCTA CAGCCGCGCA CGCTGCTGGC GCCGTTGCTG
GGCGAGGCGC GCATGCGCGG CGTTCTGGGC GGGGTGGTGG ATGCGGTCTG CGTCATCGCC
GTGGTCGCCG GTACCGTGGG GCCCATCGGC TTTCTGGCGA CCCAGATGAA CTTCGGCCTG
CATACGCTGT TCGGCGTGAC CGAGGGCTAT GGCACCCAGT TGATGATCCT CGTCGTACTG
GGCGGGCTCT ATGTGAGTTC GGCGATCACC GGCGTCGATC GTGGCATCCA GATGCTGAGC
CGTTTCAATG TCATGCTGGC ATTGGGTATT GGCGCCGTGA TCCTGCTCTT CGGATCCACC
CAGTTTCTGT TCGATAGCTG GTTCCAGGGG TTCGGCACCT ATCTGGGATC GTTCTTCGAG
ATGGCCACCA TGACCTCGCA GGCCGCGCCG GACTGGTGGA TGAAGTGGTG GACGGTATTC
TTCTTCGCCT GGTTCATCGG CTATGCGCCA TTGATGGCGA TCTTCGTGGC GCGTATCTCG
CGAGGGCGCA CCATTCGTCA GCTGGTCGTC GCCGTGGCCT TGCTCGCTCC CGTGGCCACC
TCGTTGTGGT TCACTCTGCT GGGCGGCTCG GGCATCTTCT ACCAGATGAG CGGTGCCATC
GATCTCGGCG AGGCGCTCAA CGACTTCCAG TTCGATGTCG CCACGCTGGC GGTGGCGCAG
GCACTGCCGG GCGGTAAATT GATGGCGCTG GCGGTGCTGG TGCTGACCAC GATCTTCGTG
GCCACCACCG GCGACTCCAT GAGCTACGCG GTTTCCGTGG TCAATGCCGG GCACGACGAC
CCCCAGCCGG CGCTGCGCGC ATTCTGGGGC GTGGCCATGG CGTTGATGGC GGCGGTTCTA
CTCTACATGG GGGCCGGGCA GATCGGCGTG CTGCAGCAAT TCATCGTGAT CACGGCGTTC
CCCGTGTCGC TGGTGCTGCT GCCCACGCTA TGGCTGGGGC CGCGCGCCGC GCAGGCCATG
GCCAGGCGTC AGGGAATCGT CACCTCGTAA
|
|---|
| Protein sequence | MRASRDDRNW TLTTQNEASA TRSGTHFGDP TVMGLSIGFI ILFVAFSLID ADAMTAAISV
GFAWTAKNLG AYFQLLLLLN LFIAVGVAVS PAGRARIGDR QRPDMGTFKW VSIILCTLLG
GGGVFFAAGE PIYHFVVTPP AFSSEPGTPA AVPNALAQSF MHWGFHAWAV LGTLAAIVLS
HHHYDRGLPL QPRTLLAPLL GEARMRGVLG GVVDAVCVIA VVAGTVGPIG FLATQMNFGL
HTLFGVTEGY GTQLMILVVL GGLYVSSAIT GVDRGIQMLS RFNVMLALGI GAVILLFGST
QFLFDSWFQG FGTYLGSFFE MATMTSQAAP DWWMKWWTVF FFAWFIGYAP LMAIFVARIS
RGRTIRQLVV AVALLAPVAT SLWFTLLGGS GIFYQMSGAI DLGEALNDFQ FDVATLAVAQ
ALPGGKLMAL AVLVLTTIFV ATTGDSMSYA VSVVNAGHDD PQPALRAFWG VAMALMAAVL
LYMGAGQIGV LQQFIVITAF PVSLVLLPTL WLGPRAAQAM ARRQGIVTS
|
|---|
| |