Gene Csal_2857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2857 
Symbol 
ID4028659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp3187703 
End bp3188866 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content68% 
IMG OID637968065 
ProductPyrrolo-quinoline quinone 
Protein accessionYP_574902 
Protein GI92114974 
COG category[S] Function unknown 
COG ID[COG1520] FOG: WD40-like repeat 
TIGRFAM ID[TIGR03300] outer membrane assembly lipoprotein YfgL 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.725617 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCGA CCCACTTTCT GTTACCGGCC GCGCTCACCT TGTCCGCCTT GCTGGCGGGG 
TGTTCAGGCA ATGTCGAGCC GCAATATCCG CCCAAGGCCC TGCAGGACTT CTCGCCCTCG
GCGACGCTCG ACGAGCGCTG GTCGGCCTCG GTCGGCGACG GTCTGGGGCG TGCACGCTAT
CCCCTGATGC CGCTGCTGGC CGACGGCACG CTCTATGCCG CGGATGCCGA CGGCCTGCTG
CGCGCCTTCG ACGCGGACAG CGGCGACACG CGCTGGGAAG TGCGCTTCGA TACCCCGTTG
TCCAGCGGCA TGACCAACGA CAGTGCGCGC CTCTACGCCG GCACCCGCAA CGGCGAGGTC
ATCGCCATCG ACCGTGACGA CGGCAGCGAA GCCTGGCGCG CGCGCGTCTC CAGCGAGGTG
TTGGCGGCAC CGCAGGTCAA CAGCGAACTG GTCGTGGTGC AGAGCGCCGA CGGCACCGTG
ACCGCACTGG ACCGTCTCTC CGGCGAGGAA GAGTGGACCT ACAGCAGCAG CCAGCCGTCC
CTGACCCTGC GCGGTACGGG CACGCCACGC GTCATCGAAC CGGTCTCGTT CGTCGGCTTC
GCCAATGGTC GCCTGGTCAC CCTGGACAAC CGCAGCGGCC AGCCGTTGTG GGACATGCGC
GTCGCCGTGC CGCAAGGGCG CACCGAAGTG GATCGCCTCG TCGACCTCGA CGGCCAGCCG
GTTCTCTCGC AGGACGGCCG CCTGTTCGTC ACCAGCTACA ACGGGCGGGT CATGGCGCTC
GAAGCCACCA GCGGCGAAGT GATCTGGTCA CGCGACGAGT CCAGTTATCT GACGCCCCTG
CGCGTCGGCA ACTACCTCTT CACCGTCAAC GAAGCCAGCC ACGTCCTGGC GCTCGACGTC
GACAGCGGTC GCGTGCTGTG GGAGTCCGAC GCCCTGGAAG GCCGCGACCT GACCGCCCCG
GCGTTCGTCG ACGGCAAGCT GGCACTGGGC GATTACCAGG GCTACGTGCA CCTGCTGAAC
GCCACCGACG GGTCGGTCGT GGGACGCACC GAACTCGGCG GCGATGGTAT CAGCGTACCT
CTGCTGGCCG ATTCACAGCG TCTCTACACG CTCGCCAACG ATGGGGAACT CGCCGCCTAC
GACGTCGAGA CCATCGACGA CTGA
 
Protein sequence
MKPTHFLLPA ALTLSALLAG CSGNVEPQYP PKALQDFSPS ATLDERWSAS VGDGLGRARY 
PLMPLLADGT LYAADADGLL RAFDADSGDT RWEVRFDTPL SSGMTNDSAR LYAGTRNGEV
IAIDRDDGSE AWRARVSSEV LAAPQVNSEL VVVQSADGTV TALDRLSGEE EWTYSSSQPS
LTLRGTGTPR VIEPVSFVGF ANGRLVTLDN RSGQPLWDMR VAVPQGRTEV DRLVDLDGQP
VLSQDGRLFV TSYNGRVMAL EATSGEVIWS RDESSYLTPL RVGNYLFTVN EASHVLALDV
DSGRVLWESD ALEGRDLTAP AFVDGKLALG DYQGYVHLLN ATDGSVVGRT ELGGDGISVP
LLADSQRLYT LANDGELAAY DVETIDD